Details for gene set REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION[GSEA]

Table: GSEA Results Summary

Dataset	NOV0135_D11_log2foldchange_preranked
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION
Enrichment Score (ES)	0.5853301
Normalized Enrichment Score (NES)	2.2496703
Nominal p-value	0.0
FDR q-value	4.2238442E-4
FWER p-Value	0.001

Fig 1: Enrichment plot: REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL8A1			290	4.756	0.0323	Yes
2	COL3A1			444	4.306	0.0645	Yes
3	COL5A3			469	4.243	0.0996	Yes
4	COL12A1			502	4.180	0.1340	Yes
5	MMP7			591	4.023	0.1656	Yes
6	MMP1			668	3.826	0.1958	Yes
7	MMP9			834	3.549	0.2213	Yes
8	MMP2			1281	3.155	0.2358	Yes
9	CTRB1			1319	3.085	0.2609	Yes
10	COL5A1			1472	3.013	0.2822	Yes
11	TIMP1			2086	2.687	0.2882	Yes
12	COL21A1			2309	2.471	0.3031	Yes
13	COL1A2			2328	2.443	0.3232	Yes
14	COL6A3			2337	2.421	0.3434	Yes
15	COL6A2			2413	2.363	0.3613	Yes
16	COL15A1			2422	2.359	0.3810	Yes
17	COL1A1			3148	2.121	0.3792	Yes
18	BMP1			3281	2.040	0.3929	Yes
19	PPIB			3336	2.021	0.4085	Yes
20	MMP8			4243	1.927	0.4001	Yes
21	COL4A1			5119	1.780	0.3914	Yes
22	P4HB			5339	1.687	0.3997	Yes
23	MMP24			5468	1.634	0.4100	Yes
24	MMP14			5536	1.622	0.4219	Yes
25	COL4A2			5574	1.601	0.4344	Yes
26	MMP25			5602	1.596	0.4471	Yes
27	TIMP2			5708	1.553	0.4574	Yes
28	PLOD1			5842	1.525	0.4667	Yes
29	COL8A2			5853	1.522	0.4792	Yes
30	CTRB2			6038	1.459	0.4866	Yes
31	COL6A1			6238	1.407	0.4930	Yes
32	PCOLCE			6263	1.398	0.5042	Yes
33	COL10A1			6360	1.372	0.5132	Yes
34	ADAMTS14			6371	1.371	0.5245	Yes
35	PLOD3			6373	1.370	0.5360	Yes
36	MMP10			6462	1.356	0.5450	Yes
37	KLKB1			6490	1.347	0.5557	Yes
38	SERPINH1			6552	1.329	0.5652	Yes
39	COL23A1			6778	1.303	0.5701	Yes
40	COL13A1			7131	1.227	0.5709	Yes
41	COL11A2			7169	1.218	0.5802	Yes
42	TLL2			7355	1.201	0.5853	Yes
43	FURIN			7929	1.101	0.5791	No
44	COL4A3			8325	1.035	0.5771	No
45	COL16A1			9608	0.855	0.5495	No
46	MMP11			9925	0.829	0.5479	No
47	MMP17			10464	0.769	0.5398	No
48	MMP15			10497	0.765	0.5454	No
49	CRTAP			10843	0.734	0.5422	No
50	COL25A1			14525	0.378	0.4455	No
51	COL27A1			17169	0.099	0.3746	No
52	COL11A1			17329	0.081	0.3710	No
53	COL24A1			19120	-0.106	0.3233	No
54	COL4A6			19436	-0.138	0.3159	No
55	COL9A3			19536	-0.150	0.3145	No
56	COL7A1			19797	-0.178	0.3089	No
57	PLOD2			20084	-0.202	0.3029	No
58	COL17A1			20406	-0.234	0.2961	No
59	TLL1			20732	-0.266	0.2896	No
60	COL4A4			20885	-0.282	0.2878	No
61	ADAMTS2			21126	-0.302	0.2839	No
62	COL2A1			21231	-0.315	0.2837	No
63	CMA1			21862	-0.383	0.2698	No
64	ADAMTS3			22022	-0.400	0.2689	No
65	COL9A1			22587	-0.443	0.2573	No
66	COL4A5			22847	-0.469	0.2542	No
67	COL5A2			24734	-0.655	0.2086	No
68	COL14A1			25319	-0.719	0.1988	No
69	COL9A2			27990	-0.903	0.1339	No
70	ELANE			29137	-0.952	0.1109	No
71	MMP3			30126	-1.066	0.0931	No
72	COL28A1			30689	-1.145	0.0875	No
73	COL22A1			30847	-1.174	0.0931	No
74	COL19A1			31443	-1.271	0.0877	No
75	PCOLCE2			31504	-1.284	0.0969	No
76	PRSS1			32513	-1.512	0.0823	No
77	MMP16			33024	-1.637	0.0823	No
78	PLG			35971	-2.782	0.0258	No

Fig 2: REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION: Random ES distribution   
Gene set null distribution of ES for REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION