DatasetNS50719_832_corrected2_collapsed_to_symbols.NS50719_832.cls
#arhinia_versus_control.NS50719_832.cls
#arhinia_versus_control_repos
PhenotypeNS50719_832.cls#arhinia_versus_control_repos
Upregulated in class1
GeneSetBIOCARTA_HDAC_PATHWAY
Enrichment Score (ES)0.7030774
Normalized Enrichment Score (NES)1.5743339
Nominal p-value0.0
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: BIOCARTA_HDAC_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CAMK1GCAMK1G
Entrez,  Source
calcium/calmodulin-dependent protein kinase IG323.2860.3110Yes
2MEF2CMEF2C
Entrez,  Source
MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C)513.0340.5986Yes
3CAMK1CAMK1
Entrez,  Source
calcium/calmodulin-dependent protein kinase I12051.2350.6578Yes
4NFATC2NFATC2
Entrez,  Source
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 220340.9160.7031Yes
5MAP2K6MAP2K6
Entrez,  Source
mitogen-activated protein kinase kinase 649940.3300.5848No
6PIK3R1PIK3R1
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 1 (p85 alpha)58200.2470.5665No
7PPP3CAPPP3CA
Entrez,  Source
protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha)67660.1790.5358No
8NFATC1NFATC1
Entrez,  Source
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 170200.1640.5387No
9PIK3CAPIK3CA
Entrez,  Source
phosphoinositide-3-kinase, catalytic, alpha polypeptide71020.1600.5498No
10CABIN1CABIN1
Entrez,  Source
-77080.1310.5317No
11MAPK14MAPK14
Entrez,  Source
mitogen-activated protein kinase 1485690.0950.4973No
12HDAC5HDAC5
Entrez,  Source
histone deacetylase 594450.0660.4593No
13MEF2DMEF2D
Entrez,  Source
MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D)95690.0630.4591No
14CALM3CALM3
Entrez,  Source
calmodulin 3 (phosphorylase kinase, delta)101630.0460.4335No
15PPP3CBPPP3CB
Entrez,  Source
protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta)105240.0360.4187No
16MEF2AMEF2A
Entrez,  Source
MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)106440.0330.4158No
17CALM2CALM2
Entrez,  Source
calmodulin 2 (phosphorylase kinase, delta)12498-0.0140.3234No
18PPP3CCPPP3CC
Entrez,  Source
protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform (calcineurin A gamma)12580-0.0160.3209No
19INSRINSR
Entrez,  Source
insulin receptor13235-0.0320.2909No
20AKT1AKT1
Entrez,  Source
v-akt murine thymoma viral oncogene homolog 113456-0.0390.2834No
21IGF1RIGF1R
Entrez,  Source
insulin-like growth factor 1 receptor14698-0.0750.2278No
22CALM1CALM1
Entrez,  Source
calmodulin 1 (phosphorylase kinase, delta)15059-0.0890.2180No
23YWHAHYWHAH
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide15493-0.1080.2064No
24MAPK7MAPK7
Entrez,  Source
mitogen-activated protein kinase 715690-0.1190.2078No
Table: GSEA details [plain text format]



Fig 2: BIOCARTA_HDAC_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BIOCARTA_HDAC_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_HDAC_PATHWAY