DatasetNS50719_832_corrected2_collapsed_to_symbols.NS50719_832.cls
#arhinia_versus_control.NS50719_832.cls
#arhinia_versus_control_repos
PhenotypeNS50719_832.cls#arhinia_versus_control_repos
Upregulated in class1
GeneSetBIOCARTA_PGC1A_PATHWAY
Enrichment Score (ES)0.6749261
Normalized Enrichment Score (NES)1.4684712
Nominal p-value0.027989822
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: BIOCARTA_PGC1A_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CAMK1GCAMK1G
Entrez,  Source
calcium/calmodulin-dependent protein kinase IG323.2860.3184Yes
2MEF2CMEF2C
Entrez,  Source
MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C)513.0340.6130Yes
3CAMK1CAMK1
Entrez,  Source
calcium/calmodulin-dependent protein kinase I12051.2350.6749Yes
4PPARAPPARA
Entrez,  Source
peroxisome proliferative activated receptor, alpha35320.5470.6106No
5SLC2A4SLC2A4
Entrez,  Source
solute carrier family 2 (facilitated glucose transporter), member 441130.4460.6247No
6CAMK4CAMK4
Entrez,  Source
calcium/calmodulin-dependent protein kinase IV44370.3950.6468No
7PPP3CAPPP3CA
Entrez,  Source
protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha)67660.1790.5466No
8CAMK2GCAMK2G
Entrez,  Source
calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma73540.1470.5312No
9HDAC5HDAC5
Entrez,  Source
histone deacetylase 594450.0660.4320No
10MEF2DMEF2D
Entrez,  Source
MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D)95690.0630.4320No
11ESRRAESRRA
Entrez,  Source
estrogen-related receptor alpha99830.0510.4161No
12CALM3CALM3
Entrez,  Source
calmodulin 3 (phosphorylase kinase, delta)101630.0460.4115No
13PPP3CBPPP3CB
Entrez,  Source
protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta)105240.0360.3968No
14MEF2AMEF2A
Entrez,  Source
MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)106440.0330.3940No
15CALM2CALM2
Entrez,  Source
calmodulin 2 (phosphorylase kinase, delta)12498-0.0140.3017No
16PPP3CCPPP3CC
Entrez,  Source
protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform (calcineurin A gamma)12580-0.0160.2991No
17CALM1CALM1
Entrez,  Source
calmodulin 1 (phosphorylase kinase, delta)15059-0.0890.1825No
18YWHAHYWHAH
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide15493-0.1080.1711No
19CAMK2DCAMK2D
Entrez,  Source
calcium/calmodulin-dependent protein kinase (CaM kinase) II delta16175-0.1480.1511No
20PPARGC1APPARGC1A
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, alpha17509-0.3300.1158No
Table: GSEA details [plain text format]



Fig 2: BIOCARTA_PGC1A_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BIOCARTA_PGC1A_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_PGC1A_PATHWAY