DatasetNS50719_832_corrected2_collapsed_to_symbols.NS50719_832.cls
#arhinia_versus_control.NS50719_832.cls
#arhinia_versus_control_repos
PhenotypeNS50719_832.cls#arhinia_versus_control_repos
Upregulated in class1
GeneSetGNF2_HPN
Enrichment Score (ES)0.5651021
Normalized Enrichment Score (NES)1.4627788
Nominal p-value0.004484305
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_HPN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GSTM1GSTM1
Entrez,  Source
glutathione S-transferase M105.0000.1181Yes
2F10F10
Entrez,  Source
coagulation factor X143.6830.2045Yes
3CYP2C8CYP2C8
Entrez,  Source
cytochrome P450, family 2, subfamily C, polypeptide 81242.5970.2603Yes
4FTCDFTCD
Entrez,  Source
formiminotransferase cyclodeaminase1942.3030.3112Yes
5SLC22A7SLC22A7
Entrez,  Source
solute carrier family 22 (organic anion transporter), member 72472.1570.3596Yes
6HGFACHGFAC
Entrez,  Source
HGF activator6361.6180.3781Yes
7SERPINF2SERPINF2
Entrez,  Source
serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 27341.5200.4091Yes
8CYP2D6CYP2D6
Entrez,  Source
cytochrome P450, family 2, subfamily D, polypeptide 611541.2610.4177Yes
9F12F12
Entrez,  Source
coagulation factor XII (Hageman factor)12111.2320.4439Yes
10ALDH1L1ALDH1L1
Entrez,  Source
aldehyde dehydrogenase 1 family, member L113261.1800.4660Yes
11CES1CES1
Entrez,  Source
carboxylesterase 1 (monocyte/macrophage serine esterase 1)13581.1650.4920Yes
12ABCC6ABCC6
Entrez,  Source
ATP-binding cassette, sub-family C (CFTR/MRP), member 621230.8900.4743Yes
13MASP2MASP2
Entrez,  Source
mannan-binding lectin serine peptidase 221760.8750.4923Yes
14CYP27A1CYP27A1
Entrez,  Source
cytochrome P450, family 27, subfamily A, polypeptide 121910.8710.5122Yes
15MAT1AMAT1A
Entrez,  Source
methionine adenosyltransferase I, alpha24140.8120.5201Yes
16SARDHSARDH
Entrez,  Source
sarcosine dehydrogenase24330.8070.5383Yes
17AKR7A3AKR7A3
Entrez,  Source
aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)24710.7940.5551Yes
18GSTM2GSTM2
Entrez,  Source
glutathione S-transferase M2 (muscle)26850.7330.5616Yes
19HPNHPN
Entrez,  Source
hepsin (transmembrane protease, serine 1)30590.6420.5579Yes
20LCATLCAT
Entrez,  Source
lecithin-cholesterol acyltransferase34140.5710.5535Yes
21HPXHPX
Entrez,  Source
hemopexin35340.5460.5603Yes
22RDH16RDH16
Entrez,  Source
retinol dehydrogenase 16 (all-trans)39400.4690.5509Yes
23ORM1ORM1
Entrez,  Source
orosomucoid 140040.4590.5585Yes
24SLC38A3SLC38A3
Entrez,  Source
solute carrier family 38, member 341360.4420.5623Yes
25TMPRSS6TMPRSS6
Entrez,  Source
transmembrane protease, serine 644330.3950.5567Yes
26GNMTGNMT
Entrez,  Source
glycine N-methyltransferase46070.3720.5567Yes
27CES2CES2
Entrez,  Source
carboxylesterase 2 (intestine, liver)46350.3690.5641Yes
28ORM2ORM2
Entrez,  Source
orosomucoid 248560.3440.5610Yes
29SLC25A10SLC25A10
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 1049330.3360.5651Yes
30HMGCLHMGCL
Entrez,  Source
3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase (hydroxymethylglutaricaciduria)53560.2880.5505No
31ZGPATZGPAT
Entrez,  Source
zinc finger, CCCH-type with G patch domain61450.2210.5158No
32TSTTST
Entrez,  Source
thiosulfate sulfurtransferase (rhodanese)62200.2170.5172No
33TMEM176BTMEM176B
Entrez,  Source
transmembrane protein 176B63750.2060.5142No
34RARRES2RARRES2
Entrez,  Source
retinoic acid receptor responder (tazarotene induced) 268240.1760.4957No
35SLC27A5SLC27A5
Entrez,  Source
solute carrier family 27 (fatty acid transporter), member 575210.1400.4637No
36HAAOHAAO
Entrez,  Source
3-hydroxyanthranilate 3,4-dioxygenase84380.1010.4197No
37PIPOXPIPOX
Entrez,  Source
pipecolic acid oxidase85190.0970.4179No
38HPDHPD
Entrez,  Source
4-hydroxyphenylpyruvate dioxygenase90010.0800.3954No
39ALDH4A1ALDH4A1
Entrez,  Source
aldehyde dehydrogenase 4 family, member A193850.0680.3776No
40ANGANG
Entrez,  Source
angiogenin, ribonuclease, RNase A family, 596740.0600.3644No
41SERPING1SERPING1
Entrez,  Source
serpin peptidase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)98170.0560.3586No
42RBP4RBP4
Entrez,  Source
retinol binding protein 4, plasma107490.0300.3121No
43PROCPROC
Entrez,  Source
protein C (inactivator of coagulation factors Va and VIIIa)108200.0280.3092No
44DCXRDCXR
Entrez,  Source
dicarbonyl/L-xylulose reductase109590.0240.3028No
45ASLASL
Entrez,  Source
argininosuccinate lyase109600.0240.3034No
46QPRTQPRT
Entrez,  Source
quinolinate phosphoribosyltransferase (nicotinate-nucleotide pyrophosphorylase (carboxylating))114140.0120.2807No
47SHMT1SHMT1
Entrez,  Source
serine hydroxymethyltransferase 1 (soluble)115410.0090.2745No
48PEMTPEMT
Entrez,  Source
phosphatidylethanolamine N-methyltransferase118090.0030.2611No
49AHSGAHSG
Entrez,  Source
alpha-2-HS-glycoprotein12336-0.0100.2346No
50PCK2PCK2
Entrez,  Source
phosphoenolpyruvate carboxykinase 2 (mitochondrial)12523-0.0150.2256No
51KHKKHK
Entrez,  Source
ketohexokinase (fructokinase)13559-0.0410.1741No
52FAHFAH
Entrez,  Source
fumarylacetoacetate hydrolase (fumarylacetoacetase)13672-0.0440.1694No
53ECHS1ECHS1
Entrez,  Source
enoyl Coenzyme A hydratase, short chain, 1, mitochondrial13852-0.0490.1615No
54C8GC8G
Entrez,  Source
complement component 8, gamma polypeptide13968-0.0520.1569No
55TMEM176ATMEM176A
Entrez,  Source
transmembrane protein 176A13989-0.0530.1572No
56GAMTGAMT
Entrez,  Source
guanidinoacetate N-methyltransferase14448-0.0670.1355No
57ASS1ASS1
Entrez,  Source
argininosuccinate synthetase 114849-0.0800.1172No
58GSTZ1GSTZ1
Entrez,  Source
glutathione transferase zeta 1 (maleylacetoacetate isomerase)15200-0.0950.1017No
59APOC1APOC1
Entrez,  Source
apolipoprotein C-I15349-0.1010.0965No
60PXMP2PXMP2
Entrez,  Source
peroxisomal membrane protein 2, 22kDa16197-0.1490.0571No
61ADH6ADH6
Entrez,  Source
alcohol dehydrogenase 6 (class V)17165-0.2610.0143No
62PON1PON1
Entrez,  Source
paraoxonase 117294-0.2820.0145No
63CYP2B6CYP2B6
Entrez,  Source
cytochrome P450, family 2, subfamily B, polypeptide 617321-0.2880.0199No
64VTNVTN
Entrez,  Source
vitronectin17550-0.3360.0163No
65ACOX2ACOX2
Entrez,  Source
acyl-Coenzyme A oxidase 2, branched chain17767-0.3890.0146No
66AMBPAMBP
Entrez,  Source
alpha-1-microglobulin/bikunin precursor17865-0.4160.0195No
67HSD17B6HSD17B6
Entrez,  Source
hydroxysteroid (17-beta) dehydrogenase 617954-0.4410.0254No
68PON3PON3
Entrez,  Source
paraoxonase 318141-0.5000.0278No
69CYP2E1CYP2E1
Entrez,  Source
cytochrome P450, family 2, subfamily E, polypeptide 118430-0.6150.0278No
70ATF5ATF5
Entrez,  Source
activating transcription factor 518484-0.6360.0401No
71C3C3
Entrez,  Source
complement component 319281-1.1220.0263No
Table: GSEA details [plain text format]



Fig 2: GNF2_HPN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_HPN: Random ES distribution   
Gene set null distribution of ES for GNF2_HPN