DatasetNS50719_832_corrected2_collapsed_to_symbols.NS50719_832.cls
#arhinia_versus_control.NS50719_832.cls
#arhinia_versus_control_repos
PhenotypeNS50719_832.cls#arhinia_versus_control_repos
Upregulated in class1
GeneSetGNF2_TST
Enrichment Score (ES)0.58795315
Normalized Enrichment Score (NES)1.516675
Nominal p-value0.005605381
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_TST   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GSTM1GSTM1
Entrez,  Source
glutathione S-transferase M105.0000.1254Yes
2F10F10
Entrez,  Source
coagulation factor X143.6830.2171Yes
3CYP2C8CYP2C8
Entrez,  Source
cytochrome P450, family 2, subfamily C, polypeptide 81242.5970.2768Yes
4FTCDFTCD
Entrez,  Source
formiminotransferase cyclodeaminase1942.3030.3310Yes
5SLC22A7SLC22A7
Entrez,  Source
solute carrier family 22 (organic anion transporter), member 72472.1570.3825Yes
6HGFACHGFAC
Entrez,  Source
HGF activator6361.6180.4034Yes
7SERPINF2SERPINF2
Entrez,  Source
serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 27341.5200.4366Yes
8CYP2D6CYP2D6
Entrez,  Source
cytochrome P450, family 2, subfamily D, polypeptide 611541.2610.4470Yes
9F12F12
Entrez,  Source
coagulation factor XII (Hageman factor)12111.2320.4751Yes
10ALDH1L1ALDH1L1
Entrez,  Source
aldehyde dehydrogenase 1 family, member L113261.1800.4989Yes
11CES1CES1
Entrez,  Source
carboxylesterase 1 (monocyte/macrophage serine esterase 1)13581.1650.5266Yes
12ABCC6ABCC6
Entrez,  Source
ATP-binding cassette, sub-family C (CFTR/MRP), member 621230.8900.5102Yes
13CYP27A1CYP27A1
Entrez,  Source
cytochrome P450, family 27, subfamily A, polypeptide 121910.8710.5286Yes
14MAT1AMAT1A
Entrez,  Source
methionine adenosyltransferase I, alpha24140.8120.5377Yes
15SARDHSARDH
Entrez,  Source
sarcosine dehydrogenase24330.8070.5570Yes
16AKR7A3AKR7A3
Entrez,  Source
aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)24710.7940.5751Yes
17GSTM2GSTM2
Entrez,  Source
glutathione S-transferase M2 (muscle)26850.7330.5827Yes
18HPNHPN
Entrez,  Source
hepsin (transmembrane protease, serine 1)30590.6420.5799Yes
19LCATLCAT
Entrez,  Source
lecithin-cholesterol acyltransferase34140.5710.5763Yes
20HPXHPX
Entrez,  Source
hemopexin35340.5460.5839Yes
21RDH16RDH16
Entrez,  Source
retinol dehydrogenase 16 (all-trans)39400.4690.5752Yes
22ORM1ORM1
Entrez,  Source
orosomucoid 140040.4590.5835Yes
23SLC38A3SLC38A3
Entrez,  Source
solute carrier family 38, member 341360.4420.5880Yes
24GNMTGNMT
Entrez,  Source
glycine N-methyltransferase46070.3720.5735No
25CES2CES2
Entrez,  Source
carboxylesterase 2 (intestine, liver)46350.3690.5814No
26ORM2ORM2
Entrez,  Source
orosomucoid 248560.3440.5788No
27HMGCLHMGCL
Entrez,  Source
3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase (hydroxymethylglutaricaciduria)53560.2880.5608No
28PKLRPKLR
Entrez,  Source
pyruvate kinase, liver and RBC53740.2870.5671No
29TFR2TFR2
Entrez,  Source
transferrin receptor 254660.2780.5695No
30ZGPATZGPAT
Entrez,  Source
zinc finger, CCCH-type with G patch domain61450.2210.5407No
31TSTTST
Entrez,  Source
thiosulfate sulfurtransferase (rhodanese)62200.2170.5424No
32TMEM176BTMEM176B
Entrez,  Source
transmembrane protein 176B63750.2060.5397No
33RARRES2RARRES2
Entrez,  Source
retinoic acid receptor responder (tazarotene induced) 268240.1760.5214No
34SLC27A5SLC27A5
Entrez,  Source
solute carrier family 27 (fatty acid transporter), member 575210.1400.4897No
35HPDHPD
Entrez,  Source
4-hydroxyphenylpyruvate dioxygenase90010.0800.4168No
36ALDH4A1ALDH4A1
Entrez,  Source
aldehyde dehydrogenase 4 family, member A193850.0680.3991No
37ANGANG
Entrez,  Source
angiogenin, ribonuclease, RNase A family, 596740.0600.3860No
38SERPING1SERPING1
Entrez,  Source
serpin peptidase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)98170.0560.3802No
39RBP4RBP4
Entrez,  Source
retinol binding protein 4, plasma107490.0300.3338No
40PROCPROC
Entrez,  Source
protein C (inactivator of coagulation factors Va and VIIIa)108200.0280.3309No
41DCXRDCXR
Entrez,  Source
dicarbonyl/L-xylulose reductase109590.0240.3245No
42ASLASL
Entrez,  Source
argininosuccinate lyase109600.0240.3252No
43QPRTQPRT
Entrez,  Source
quinolinate phosphoribosyltransferase (nicotinate-nucleotide pyrophosphorylase (carboxylating))114140.0120.3025No
44AHSGAHSG
Entrez,  Source
alpha-2-HS-glycoprotein12336-0.0100.2561No
45PCK2PCK2
Entrez,  Source
phosphoenolpyruvate carboxykinase 2 (mitochondrial)12523-0.0150.2470No
46KHKKHK
Entrez,  Source
ketohexokinase (fructokinase)13559-0.0410.1956No
47FAHFAH
Entrez,  Source
fumarylacetoacetate hydrolase (fumarylacetoacetase)13672-0.0440.1911No
48ECHS1ECHS1
Entrez,  Source
enoyl Coenzyme A hydratase, short chain, 1, mitochondrial13852-0.0490.1832No
49C8GC8G
Entrez,  Source
complement component 8, gamma polypeptide13968-0.0520.1787No
50TMEM176ATMEM176A
Entrez,  Source
transmembrane protein 176A13989-0.0530.1790No
51GAMTGAMT
Entrez,  Source
guanidinoacetate N-methyltransferase14448-0.0670.1575No
52GSTZ1GSTZ1
Entrez,  Source
glutathione transferase zeta 1 (maleylacetoacetate isomerase)15200-0.0950.1218No
53APOC1APOC1
Entrez,  Source
apolipoprotein C-I15349-0.1010.1168No
54PXMP2PXMP2
Entrez,  Source
peroxisomal membrane protein 2, 22kDa16197-0.1490.0777No
55ETFBETFB
Entrez,  Source
electron-transfer-flavoprotein, beta polypeptide17133-0.2570.0367No
56PON1PON1
Entrez,  Source
paraoxonase 117294-0.2820.0357No
57CYP2B6CYP2B6
Entrez,  Source
cytochrome P450, family 2, subfamily B, polypeptide 617321-0.2880.0416No
58VTNVTN
Entrez,  Source
vitronectin17550-0.3360.0385No
59ACOX2ACOX2
Entrez,  Source
acyl-Coenzyme A oxidase 2, branched chain17767-0.3890.0373No
60AMBPAMBP
Entrez,  Source
alpha-1-microglobulin/bikunin precursor17865-0.4160.0428No
61HSD17B6HSD17B6
Entrez,  Source
hydroxysteroid (17-beta) dehydrogenase 617954-0.4410.0494No
62PON3PON3
Entrez,  Source
paraoxonase 318141-0.5000.0525No
63CYP2E1CYP2E1
Entrez,  Source
cytochrome P450, family 2, subfamily E, polypeptide 118430-0.6150.0534No
64ATF5ATF5
Entrez,  Source
activating transcription factor 518484-0.6360.0666No
Table: GSEA details [plain text format]



Fig 2: GNF2_TST   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_TST: Random ES distribution   
Gene set null distribution of ES for GNF2_TST