## Beginning of track view track hoffmanH3K27acFeb2015 compositeTrack on shortLabel Hoffman H3K27ac Feb2015 longLabel Hoffman H3K27ac Feb2015 priority 1500 visibility full type bed 3 configurable on subGroup1 view Views \ COV=Coverage \ PEAK=Peaks \ JUNC=Junctions subGroup2 Group1 Group1 \ dHSA=dHSA \ SW13=SW13 subGroup3 Group2 Group2 \ H3K27ac=H3K27ac \ Input=Input dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ view=+ ## Views track coverage data track hoffmanH3K27acFeb2015View1 parent hoffmanH3K27acFeb2015 shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 viewUi on ## Coverage track track MES690HSAH3K27ac_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl MES690HSAH3K27ac_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel dHSA_H3K27ac MES690 longLabel dHSA_H3K27ac MES690 type bigWig color 76,15,133 priority 1502 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=dHSA Group2=H3K27ac view=COV ## Coverage track track MES690HSAInput_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl MES690HSAInput_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel dHSA_Input MES690 longLabel dHSA_Input MES690 type bigWig color 131,110,150 priority 1504 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=dHSA Group2=Input view=COV ## Coverage track track MES690SW13H3K27ac_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl MES690SW13H3K27ac_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel SW13_H3K27ac MES690 longLabel SW13_H3K27ac MES690 type bigWig color 0,100,133 priority 1506 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=SW13 Group2=H3K27ac view=COV ## Coverage track track MES690SW13Input_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl MES690SW13Input_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel SW13_Input MES690 longLabel SW13_Input MES690 type bigWig color 102,138,150 priority 1508 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=SW13 Group2=Input view=COV ## Coverage track track NS50033HSAH3K27ac_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl NS50033HSAH3K27ac_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel dHSA_H3K27ac NS50033 longLabel dHSA_H3K27ac NS50033 type bigWig color 76,15,133 priority 1510 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility full subGroups Group1=dHSA Group2=H3K27ac view=COV ## Coverage track track NS50033HSAinput_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl NS50033HSAinput_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel dHSA_Input NS50033 longLabel dHSA_Input NS50033 type bigWig color 131,110,150 priority 1512 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility full subGroups Group1=dHSA Group2=Input view=COV ## Coverage track track NS50033SW13H3K27ac_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl NS50033SW13H3K27ac_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel SW13_H3K27ac NS50033 longLabel SW13_H3K27ac NS50033 type bigWig color 0,100,133 priority 1514 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility full subGroups Group1=SW13 Group2=H3K27ac view=COV ## Coverage track track NS50033SW13input_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl NS50033SW13input_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel SW13_Input NS50033 longLabel SW13_Input NS50033 type bigWig color 102,138,150 priority 1516 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility full subGroups Group1=SW13 Group2=Input view=COV ## Views track for ChIPseq peaks track hoffmanH3K27acFeb2015View3 parent hoffmanH3K27acFeb2015 shortLabel Peaks view PEAK visibility pack type bigBed allButtonPair on centerLabelsDense on dragAndDrop on viewUi on # Peak track track dhsa_H3K27acVsDhsa_Input_200 parent hoffmanH3K27acFeb2015View3 on bigDataUrl homerComparison_dHSA_H3K27ac-Vs-dHSA_Input.findPeaks_none-region.200.50_fdr0.001_p0.0001_foc0_loc2000_fc4_min10.sorted.bb shortLabel dHSA_H3K27ac peaks (200 width, 50 mindist) longLabel dHSA_H3K27ac peaks (200 width, 50 mindist) type bigBed visibility hide priority 1518 color 76,15,133 subGroups Group1=dHSA Group2=H3K27ac view=PEAK # Peak track track dhsa_H3K27acVsDhsa_Input_300 parent hoffmanH3K27acFeb2015View3 on bigDataUrl homerComparison_dHSA_H3K27ac-Vs-dHSA_Input.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min10.sorted.bb shortLabel dHSA_H3K27ac peaks longLabel dHSA_H3K27ac peaks type bigBed visibility pack priority 1511 color 76,15,133 subGroups Group1=dHSA Group2=H3K27ac view=PEAK # Peak track track sw13_H3K27acVsSw13_Input_200 parent hoffmanH3K27acFeb2015View3 on bigDataUrl homerComparison_SW13_H3K27ac-Vs-SW13_Input.findPeaks_none-region.200.50_fdr0.001_p0.0001_foc0_loc2000_fc4_min10.sorted.bb shortLabel SW13_H3K27ac peaks (200 width, 50 mindist) longLabel SW13_H3K27ac peaks (200 width, 50 mindist) type bigBed visibility hide priority 1522 color 0,100,133 subGroups Group1=SW13 Group2=H3K27ac view=PEAK # Peak track track sw13_H3K27acVsSw13_Input_300 parent hoffmanH3K27acFeb2015View3 on bigDataUrl homerComparison_SW13_H3K27ac-Vs-SW13_Input.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min10.sorted.bb shortLabel SW13_H3K27ac peaks longLabel SW13_H3K27ac peaks type bigBed visibility pack priority 1515 color 0,100,133 subGroups Group1=SW13 Group2=H3K27ac view=PEAK ## Beginning of track view track NS50384_transfectedSW13_histones compositeTrack on shortLabel NS50384 Dec2016 longLabel NS50384 Dec2016 priority 1400 visibility hide type bed 3 configurable on subGroup1 view Views \ COV=Coverage \ PEAK=Peaks \ JUNC=Junctions subGroup2 Group1 Group1 \ HSA10=HSA10 \ SW13=SW13 \ Brg1=Brg1 subGroup3 Group2 Group2 \ k27ac=k27ac \ k122ac=k122ac dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ view=+ ## Views track coverage data track NS50384_transfectedSW13_histonesView1 parent NS50384_transfectedSW13_histones shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 viewUi on ## Coverage track track SW13_k27ac parent NS50384_transfectedSW13_histonesView1 on bigDataUrl K27ac_SW13.dedupe.bw shortLabel SW13_k27ac longLabel SW13_k27ac type bigWig color 15,76,133 priority 1402 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=SW13 Group2=k27ac view=COV ## Coverage track track Brg1_k27ac parent NS50384_transfectedSW13_histonesView1 on bigDataUrl K27ac_Brg1.dedupe.bw shortLabel Brg1_k27ac longLabel Brg1_k27ac type bigWig color 17,133,15 priority 1404 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=Brg1 Group2=k27ac view=COV ## Coverage track track HSA10_k27ac parent NS50384_transfectedSW13_histonesView1 on bigDataUrl K27ac_HSA10.dedupe.bw shortLabel HSA10_k27ac longLabel HSA10_k27ac type bigWig color 131,15,133 priority 1406 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=HSA10 Group2=k27ac view=COV ## Coverage track track SW13_k122ac parent NS50384_transfectedSW13_histonesView1 on bigDataUrl K122ac_SW13.dedupe.bw shortLabel SW13_k122ac longLabel SW13_k122ac type bigWig color 15,76,133 priority 1408 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=SW13 Group2=k122ac view=COV ## Coverage track track Brg1_k122ac parent NS50384_transfectedSW13_histonesView1 on bigDataUrl K122ac_Brg1.dedupe.bw shortLabel Brg1_k122ac longLabel Brg1_k122ac type bigWig color 17,133,15 priority 1410 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=Brg1 Group2=k122ac view=COV ## Coverage track track HSA10_k122ac parent NS50384_transfectedSW13_histonesView1 on bigDataUrl K122ac_HSA10.dedupe.bw shortLabel HSA10_k122ac longLabel HSA10_k122ac type bigWig color 131,15,133 priority 1412 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=HSA10 Group2=k122ac view=COV # Ezh2_Hmec_hg19_GSM1003501.bw # Trim28_Mcf7_hg19_GSM1978809.bw # H3k27me3_Mcf7_hg19_GSM970218.bw # H3K27me3_Hmec_hg19_GSM733722.bw ## Beginning of track view track Trim28Ezh2Nov2017 compositeTrack on shortLabel Trim28 Ezh2 H3K27me3 longLabel Trim28 Ezh2 H3K27me3 priority 2500 visibility full type bed 3 configurable on subGroup1 view Views \ COV=Coverage \ PEAK=Peaks subGroup2 Group1 Group1 \ Trim28=Trim28 \ Ezh2=Ezh2 \ H3K27me3=H3K27me3 subGroup3 Group2 Group2 \ Mcf7=Mcf7 \ Hmec=Hmec dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ view=+ ## Views track coverage data track Trim28Ezh2K27me3View1 parent Trim28Ezh2Nov2017 shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 viewUi on ## Coverage track track Ezh2_Hmec_coverage parent Trim28Ezh2K27me3View1 on bigDataUrl Ezh2_Hmec_hg19_GSM1003501.bw shortLabel Ezh2_Hmec coverage longLabel Ezh2_Hmec coverage type bigWig color 191,45,55 priority 2502 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=Ezh2 Group2=Hmec view=COV ## Coverage track track Trim28_Mcf7__coverage parent Trim28Ezh2K27me3View1 on bigDataUrl Trim28_Mcf7_hg19_GSM1978809.bw shortLabel Trim28_Mcf7 coverage longLabel Trim28_Mcf7 coverage type bigWig color 40,151,25 priority 2504 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=Trim28 Group2=Mcf7 view=COV ## Coverage track track H3k27me3_Mcf7_coverage parent Trim28Ezh2K27me3View1 on bigDataUrl H3k27me3_Mcf7_hg19_GSM970218.bw shortLabel H3k27me3_Mcf7 coverage longLabel H3k27me3_Mcf7 coverage type bigWig color 133,61,200 priority 2506 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=H3k27me3 Group2=Mcf7 view=COV ## Coverage track track H3k27me3_Hmec_coverage parent Trim28Ezh2K27me3View1 on bigDataUrl H3k27me3_Hmec_hg19_GSM733722.bw shortLabel H3k27me3_Hmec coverage longLabel H3k27me3_Hmec coverage type bigWig color 63,57,163 priority 2508 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=H3k27me3 Group2=Hmec view=COV # Ezh2_Hmec_hg19_GSM1003501.broadPeak.bb # H3K27me3_Hmec_hg19_GSM733722.broadPeak.bb # H3k27me3_Mcf7_hg19_GSM970218.narrowPeak.bb ## Views track for ChIPseq peaks track Trim28Ezh2Nov2017View4 parent Trim28Ezh2Nov2017 shortLabel Peaks view PEAK visibility squish type bigBed allButtonPair on centerLabelsDense on dragAndDrop on viewUi on # Peak track track Ezh2_Hmec_peaks parent Trim28Ezh2Nov2017View4 on bigDataUrl Ezh2_Hmec_hg19_GSM1003501.broadPeak.bb shortLabel Ezh2_Hmec peaks longLabel Ezh2_Hmec peaks type bigBed visibility squish priority 2503 color 191,45,55 subGroups Group1=Ezh2 Group2=Hmec view=PEAK # Peak track track H3K27me3_Mcf7_peaks parent Trim28Ezh2Nov2017View4 on bigDataUrl H3k27me3_Mcf7_hg19_GSM970218.narrowPeak.bb shortLabel H3K27me3_Mcf7 peaks longLabel H3K27me3_Mcf7 peaks type bigBed visibility squish priority 2507 color 133,61,200 subGroups Group1=H3K27me3 Group2=Mcf7 view=PEAK # Peak track track H3K27me3_Hmec_peaks parent Trim28Ezh2Nov2017View4 on bigDataUrl H3K27me3_Hmec_hg19_GSM733722.broadPeak.bb shortLabel H3K27me3_Hmec peaks longLabel H3K27me3_Hmec peaks type bigBed visibility squish priority 2509 color 63,57,163 subGroups Group1=H3K27me3 Group2=Hmec view=PEAK