## Beginning of track view track hoffmanH3K27acFeb2015 compositeTrack on shortLabel Rubino/Hoffman H3K27ac Feb2015 longLabel Rubino/Hoffman H3K27ac Feb2015 priority 1500 visibility full type bed 3 configurable on subGroup1 view Views \ COV=Coverage \ PEAK=Peaks subGroup2 Group1 Group1 \ dHSA=dHSA \ SW13=SW13 subGroup3 Group2 Group2 \ H3K27ac=H3K27ac \ Input=Input dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ view=+ ## Views track coverage data track hoffmanH3K27acFeb2015View1 parent hoffmanH3K27acFeb2015 shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 viewUi on ## Coverage track track MES690HSAH3K27ac_coverage parent hoffmanH3K27acFeb2015View1 off bigDataUrl MES690HSAH3K27ac_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel dHSA_H3K27ac MiSeq coverage longLabel dHSA_H3K27ac MiSeq coverage type bigWig color 76,15,133 priority 1502 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=dHSA Group2=H3K27ac view=COV ## Coverage track track MES690HSAInput_coverage parent hoffmanH3K27acFeb2015View1 off bigDataUrl MES690HSAInput_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel dHSA_Input MiSeq coverage longLabel dHSA_Input MiSeq coverage type bigWig color 131,110,150 priority 1504 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=dHSA Group2=Input view=COV ## Coverage track track MES690SW13H3K27ac_coverage parent hoffmanH3K27acFeb2015View1 off bigDataUrl MES690SW13H3K27ac_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel SW13_H3K27ac MiSeq coverage longLabel SW13_H3K27ac MiSeq coverage type bigWig color 0,100,133 priority 1506 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=SW13 Group2=H3K27ac view=COV ## Coverage track track MES690SW13Input_coverage parent hoffmanH3K27acFeb2015View1 off bigDataUrl MES690SW13Input_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel SW13_Input MiSeq coverage longLabel SW13_Input MiSeq coverage type bigWig color 102,138,150 priority 1508 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=SW13 Group2=Input view=COV ## Coverage track track NS50033HSAH3K27ac_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl NS50033HSAH3K27ac_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel dHSA_H3K27ac NextSeq coverage longLabel dHSA_H3K27ac NextSeq coverage type bigWig color 76,15,133 priority 1510 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=dHSA Group2=H3K27ac view=COV ## Coverage track track NS50033HSAinput_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl NS50033HSAinput_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel dHSA_Input NextSeq coverage longLabel dHSA_Input NextSeq coverage type bigWig color 131,110,150 priority 1512 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=dHSA Group2=Input view=COV ## Coverage track track NS50033SW13H3K27ac_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl NS50033SW13H3K27ac_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel SW13_H3K27ac NextSeq coverage longLabel SW13_H3K27ac NextSeq coverage type bigWig color 0,100,133 priority 1514 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=SW13 Group2=H3K27ac view=COV ## Coverage track track NS50033SW13input_coverage parent hoffmanH3K27acFeb2015View1 on bigDataUrl NS50033SW13input_s.sickle.merged.bowtieSe_hg19.sorted.bamCov-nodupes-150-bin10-normalizeTo1x-scale.bw shortLabel SW13_Input NextSeq coverage longLabel SW13_Input NextSeq coverage type bigWig color 102,138,150 priority 1516 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=SW13 Group2=Input view=COV ## Views track for ChIPseq peaks track hoffmanH3K27acFeb2015View3 parent hoffmanH3K27acFeb2015 shortLabel Peaks view PEAK visibility pack type bigBed allButtonPair on centerLabelsDense on dragAndDrop on viewUi on # Peak track track dHSA_peaks parent hoffmanH3K27acFeb2015View3 on bigDataUrl dHSA_H3K27ac-Vs-dHSA_Input.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min10.sorted.bb shortLabel dHSA_H3K27ac dHSA peaks longLabel dHSA_H3K27ac dHSA peaks type bigBed visibility pack priority 1518 color 76,15,133 subGroups Group1=dHSA Group2=H3K27ac view=PEAK # Peak track track SW13_peaks parent hoffmanH3K27acFeb2015View3 on bigDataUrl SW13_H3K27ac-Vs-SW13_Input.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min10.sorted.bb shortLabel SW13_H3K27ac SW13 peaks longLabel SW13_H3K27ac SW13 peaks type bigBed visibility pack priority 1520 color 0,100,133 subGroups Group1=SW13 Group2=H3K27ac view=PEAK