#################################### ## track set ## Working Tracks track workingTrackSet_1 compositeTrack on shortLabel Previous MiSeq Runs longLabel Previous MiSeq Runs type bigWig allButtonPair on centerLabelsDense on dragAndDrop on priority 1200 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewLimits 0:50 visibility hide # ################################## # bigWig coverage track # MES268_InputEtOH track MES268_InputEtOH parent workingTrackSet_1 bigDataUrl MES268InputEtOH-D_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel InputEtOH coverage longLabel MES268 InputEtOH coverage type bigWig color 150,150,150 priority 1220 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES270_InputEtOHR track MES270_InputEtOHR parent workingTrackSet_1 bigDataUrl MES270InputEtOHR-C_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel InputEtOHR coverage longLabel MES270 InputEtOHR coverage type bigWig color 150,150,150 priority 1220 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES274_BRG1Dex track MES274_BRG1Dex parent workingTrackSet_1 bigDataUrl MES274BRG1Dex-9_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel BRG1Dex coverage longLabel MES274 BRG1Dex coverage type bigWig color 145,36,36 priority 1202 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES274_BRG1EtOH track MES274_BRG1EtOH parent workingTrackSet_1 bigDataUrl MES274BRG1EtOH-9_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel BRG1EtOH coverage longLabel MES274 BRG1EtOH coverage type bigWig color 188,47,47 priority 1201 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES274_GRDex track MES274_GRDex parent workingTrackSet_1 bigDataUrl MES274GRDex-9_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel GRDex coverage longLabel MES274 GRDex coverage type bigWig color 196,108,7 priority 1203 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES274_GREtOH track MES274_GREtOH parent workingTrackSet_1 bigDataUrl MES274GREtOH-9_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel GREtOH coverage longLabel MES274 GREtOH coverage type bigWig color 255,141,9 priority 1202 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES274_InputDex track MES274_InputDex parent workingTrackSet_1 bigDataUrl MES274InputDex-9_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel InputDex coverage longLabel MES274 InputDex coverage type bigWig color 100,100,100 priority 1221 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES274_InputEtOH track MES274_InputEtOH parent workingTrackSet_1 bigDataUrl MES274InputEtOH-9_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel InputEtOH coverage longLabel MES274 InputEtOH coverage type bigWig color 150,150,150 priority 1220 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on autoScale on viewLimits 0:50 visibility full ######################################## ## Working Tracks track workingTrackSet compositeTrack on shortLabel MiSeq Coverage longLabel MiSeq Coverage priority 1100 type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES338_Brg1EtOH track MES338_Brg1EtOH parent workingTrackSet full bigDataUrl MES338BRG1EtOH-M_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel Brg1EtOH coverage longLabel MES338 Brg1EtOH coverage type bigWig color 188,47,47 priority 1101 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # MES339_BRG1Dex track MES339_BRG1Dex parent workingTrackSet full bigDataUrl MES339BRG1Dex-4_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel BRG1Dex coverage longLabel MES339 BRG1Dex coverage type bigWig color 145,36,36 priority 1102 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # MES336_GREtOH track MES336_GREtOH parent workingTrackSet full bigDataUrl MES336GREtOH-L_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel GREtOH coverage longLabel MES336 GREtOH coverage type bigWig color 255,141,9 priority 1103 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # MES337_GRDex track MES337_GRDex parent workingTrackSet full bigDataUrl MES337GRDex-B_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel GRDex coverage longLabel MES337 GRDex coverage type bigWig color 196,108,7 priority 1104 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # MES291_Ku70Dex track MES286_Ku70EtOH parent workingTrackSet full bigDataUrl MES286Ku70EtOH-M_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel Ku70EtOH coverage longLabel MES286 Ku70EtOH coverage type bigWig color 47,125,8 priority 1105 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES286_Ku70EtOH track MES291_Ku70Dex parent workingTrackSet full bigDataUrl MES291Ku70Dex-G_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel Ku70Dex coverage longLabel MES291 Ku70Dex coverage type bigWig color 36,96,6 priority 1106 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES292_TOP2BEtOH track MES292_TOP2BEtOH parent workingTrackSet full bigDataUrl MES292TOP2BEtOH-J_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel TOP2BEtOH coverage longLabel MES292 TOP2BEtOH coverage type bigWig color 60,84,158 priority 1107 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES294_TOP2BDex track MES294_TOP2BDex parent workingTrackSet full bigDataUrl MES294TOP2BDex-P_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel TOP2BDex coverage longLabel MES294 TOP2BDex coverage type bigWig color 0,65,98 priority 1108 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # ################################## # bigWig coverage track # MES333_InputEtOH track MES333_InputEtOH parent workingTrackSet full bigDataUrl MES333InputEtOH-0_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel InputEtOH coverage longLabel MES333 InputEtOH coverage type bigWig color 150,150,150 priority 1120 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # MES335_InputDex track MES335_InputDex parent workingTrackSet full bigDataUrl MES335InputDex-V_s.sanger.sickle.bowtieSe_hg19.sorted.slop150.bw shortLabel InputDex coverage longLabel MES335 InputDex coverage type bigWig color 100,100,100 priority 1121 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full # MES333_InputCombined # MES333InputCombined_s.sickle.merged.bowtieSe_hg19.sorted.slop150.bw track MES333_InputCombined parent workingTrackSet full bigDataUrl MES333InputCombined_s.sickle.merged.bowtieSe_hg19.sorted.slop150.bw shortLabel InputCombined coverage longLabel MES333_MES335 InputCombined coverage type bigWig color 125,125,125 priority 1122 alwaysZero on graphTypeDefault bar maxHeightPixels 100:44:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:50 visibility full ## ChIPseq peak data composite track track trotterMiseqPeaks compositeTrack on shortLabel Trotter MiSeq ChIPseq data longLabel Trotter MiSeq ChIPseq data type bigBed allButtonPair on centerLabelsDense on dragAndDrop on priority 1600 visibility dense # BRG1EtOH_Vs_InputCombined track BRG1EtOH_Vs_InputCombined_min7 parent trotterMiseqPeaks bigDataUrl homerComparison_BRG1EtOH_Vs_InputCombined.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min7.sorted.bb shortLabel BRG1EtOH_Vs_InputComb_min7 longLabel BRG1EtOH_Vs_InputComb_min7 type bigBed color 188,47,47 visibility dense priority 1601 # BRG1Dex_Vs_InputCombined track BRG1Dex_Vs_InputCombined_min7 parent trotterMiseqPeaks bigDataUrl homerComparison_BRG1Dex_Vs_InputCombined.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min7.sorted.bb shortLabel BRG1Dex_Vs_InputComb_min7 longLabel BRG1Dex_Vs_InputComb_min7 type bigBed color 145,36,36 visibility dense priority 1602 # GREtOH_Vs_InputCombined track GREtOH_Vs_InputCombined_min7 parent trotterMiseqPeaks bigDataUrl homerComparison_GREtOH_Vs_InputCombined.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min7.sorted.bb shortLabel GREtOH_Vs_InputComb_min7 longLabel GREtOH_Vs_InputComb_min7 type bigBed color 255,141,9 visibility dense priority 1603 # GRDex_Vs_InputCombined track GRDex_Vs_InputCombined_min7 parent trotterMiseqPeaks bigDataUrl homerComparison_GRDex_Vs_InputCombined.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min7.sorted.bb shortLabel GRDex_Vs_InputComb_min7 longLabel GRDex_Vs_InputComb_min7 type bigBed color 196,108,7 visibility dense priority 1604 # Ku70EtOH_Vs_InputCombined track Ku70EtOH_Vs_InputCombined_min7 parent trotterMiseqPeaks bigDataUrl homerComparison_Ku70EtOH_Vs_InputCombined.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min7.sorted.bb shortLabel Ku70EtOH_Vs_InputComb_min7 longLabel Ku70EtOH_Vs_InputComb_min7 type bigBed color 47,125,8 visibility dense priority 1605 # Ku70Dex_Vs_InputCombined track Ku70Dex_Vs_InputCombined_min7 parent trotterMiseqPeaks bigDataUrl homerComparison_Ku70Dex_Vs_InputCombined.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min7.sorted.bb shortLabel Ku70Dex_Vs_InputComb_min7 longLabel Ku70Dex_Vs_InputComb_min7 type bigBed color 36,96,6 visibility dense priority 1606 # TOP2BEtOH_Vs_InputCombined track TOP2BEtOH_Vs_InputCombined_min7 parent trotterMiseqPeaks bigDataUrl homerComparison_TOP2BEtOH_Vs_InputCombined.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min7.sorted.bb shortLabel TOP2BEtOH_Vs_InputComb_min7 longLabel TOP2BEtOH_Vs_InputComb_min7 type bigBed color 60,84,158 visibility dense priority 1607 # TOP2BDex_Vs_InputCombined track TOP2BDex_Vs_InputCombined_min7 parent trotterMiseqPeaks bigDataUrl homerComparison_TOP2BDex_Vs_InputCombined.findPeaks_none-region.300.900_fdr0.001_p0.0001_foc0_loc2000_fc4_min7.sorted.bb shortLabel TOP2BDex_Vs_InputComb_min7 longLabel TOP2BDex_Vs_InputComb_min7 type bigBed color 0,65,98 visibility dense priority 1608