## Beginning of track view track NS50137NE4320Ce compositeTrack on shortLabel NS50137 NE4320 Ce longLabel NS50137 NE4320 Ce priority 2200 visibility full type bed 3 configurable on subGroup1 view Views \ COV=Coverage \ PEAK=Peaks \ JUNC=Junctions subGroup2 Group1 Group1 \ ISOWT=ISOWT \ NE4320=NE4320 subGroup3 Group2 Group2 \ Ce=Ce dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ view=+ ## Views track coverage data track NS50137NE4320CeView1 parent NS50137NE4320Ce shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 viewUi on ## Coverage track track ISOWTBR1_coverage parent NS50137NE4320CeView1 on bigDataUrl ISOWTBR1_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel ISOWT_Ce ISOWTBR1 coverage longLabel ISOWT_Ce ISOWTBR1 coverage type bigWig color 123,31,31 priority 2202 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=ISOWT Group2=Ce view=COV ## Coverage track track ISOWTBR2_coverage parent NS50137NE4320CeView1 on bigDataUrl ISOWTBR2_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel ISOWT_Ce ISOWTBR2 coverage longLabel ISOWT_Ce ISOWTBR2 coverage type bigWig color 123,31,31 priority 2204 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=ISOWT Group2=Ce view=COV ## Coverage track track ISOWTBR3_coverage parent NS50137NE4320CeView1 on bigDataUrl ISOWTBR3_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel ISOWT_Ce ISOWTBR3 coverage longLabel ISOWT_Ce ISOWTBR3 coverage type bigWig color 123,31,31 priority 2206 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=ISOWT Group2=Ce view=COV ## Coverage track track NE4320BR1_coverage parent NS50137NE4320CeView1 on bigDataUrl NE4320BR1_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel NE4320_Ce NE4320BR1 coverage longLabel NE4320_Ce NE4320BR1 coverage type bigWig color 141,102,0 priority 2208 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=NE4320 Group2=Ce view=COV ## Coverage track track NE4320BR2_coverage parent NS50137NE4320CeView1 on bigDataUrl NE4320BR2_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel NE4320_Ce NE4320BR2 coverage longLabel NE4320_Ce NE4320BR2 coverage type bigWig color 141,102,0 priority 2210 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=NE4320 Group2=Ce view=COV ## Coverage track track NE4320BR3_coverage parent NS50137NE4320CeView1 on bigDataUrl NE4320BR3_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel NE4320_Ce NE4320BR3 coverage longLabel NE4320_Ce NE4320BR3 coverage type bigWig color 141,102,0 priority 2212 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=NE4320 Group2=Ce view=COV ## Views track for RNAseq, junctions data track NS50137NE4320CeView2 parent NS50137NE4320Ce shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on # combined junctions track track ISOWTBR1_junctions parent NS50137NE4320CeView2 on bigDataUrl ISOWTBR1_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel ISOWT_Ce ISOWTBR1 junctions longLabel ISOWT_Ce ISOWTBR1 junctions type bigBed 12 visibility pack priority 2214 scoreMin 10 scoreMax 100 color 123,31,31 subGroups Group1=ISOWT Group2=Ce view=JUNC # combined junctions track track ISOWTBR2_junctions parent NS50137NE4320CeView2 on bigDataUrl ISOWTBR2_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel ISOWT_Ce ISOWTBR2 junctions longLabel ISOWT_Ce ISOWTBR2 junctions type bigBed 12 visibility pack priority 2216 scoreMin 10 scoreMax 100 color 123,31,31 subGroups Group1=ISOWT Group2=Ce view=JUNC # combined junctions track track ISOWTBR3_junctions parent NS50137NE4320CeView2 on bigDataUrl ISOWTBR3_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel ISOWT_Ce ISOWTBR3 junctions longLabel ISOWT_Ce ISOWTBR3 junctions type bigBed 12 visibility pack priority 2218 scoreMin 10 scoreMax 100 color 123,31,31 subGroups Group1=ISOWT Group2=Ce view=JUNC # combined junctions track track NE4320BR1_junctions parent NS50137NE4320CeView2 on bigDataUrl NE4320BR1_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel NE4320_Ce NE4320BR1 junctions longLabel NE4320_Ce NE4320BR1 junctions type bigBed 12 visibility pack priority 2220 scoreMin 10 scoreMax 100 color 141,102,0 subGroups Group1=NE4320 Group2=Ce view=JUNC # combined junctions track track NE4320BR2_junctions parent NS50137NE4320CeView2 on bigDataUrl NE4320BR2_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel NE4320_Ce NE4320BR2 junctions longLabel NE4320_Ce NE4320BR2 junctions type bigBed 12 visibility pack priority 2222 scoreMin 10 scoreMax 100 color 141,102,0 subGroups Group1=NE4320 Group2=Ce view=JUNC # combined junctions track track NE4320BR3_junctions parent NS50137NE4320CeView2 on bigDataUrl NE4320BR3_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel NE4320_Ce NE4320BR3 junctions longLabel NE4320_Ce NE4320BR3 junctions type bigBed 12 visibility pack priority 2224 scoreMin 10 scoreMax 100 color 141,102,0 subGroups Group1=NE4320 Group2=Ce view=JUNC # combined junctions track track ISOWT_Ce_junctions parent NS50137NE4320CeView2 on bigDataUrl ISOWT_Ce.TopHat2_ce10.combinedJunctions.bb shortLabel ISOWT_Ce junctions longLabel ISOWT_Ce junctions type bigBed 12 visibility pack priority 2226 scoreMin 10 scoreMax 100 color 123,31,31 subGroups Group1=ISOWT Group2=Ce view=JUNC # combined junctions track track NE4320_Ce_junctions parent NS50137NE4320CeView2 on bigDataUrl NE4320_Ce.TopHat2_ce10.combinedJunctions.bb shortLabel NE4320_Ce junctions longLabel NE4320_Ce junctions type bigBed 12 visibility pack priority 2228 scoreMin 10 scoreMax 100 color 141,102,0 subGroups Group1=NE4320 Group2=Ce view=JUNC ## Beginning of track view track NG173NE4320Ce compositeTrack on shortLabel NG173 NE4320 Ce longLabel NG173 NE4320 Ce priority 2200 visibility full type bed 3 configurable on subGroup1 view Views \ COV=Coverage \ PEAK=Peaks \ JUNC=Junctions subGroup2 Group1 Group1 \ ISOWT=ISOWT \ NE4320=NE4320 subGroup3 Group2 Group2 \ Ce=Ce dimensions dimX=Group1 dimY=Group2 sortOrder Group1=+ Group2=+ view=+ ## Views track coverage data track NG173NE4320CeView1 parent NG173NE4320Ce shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 viewUi on ## Coverage track track ES1370_coverage parent NG173NE4320CeView1 on bigDataUrl ES1370_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel ISOWT_Ce ES1370 coverage longLabel ISOWT_Ce ES1370 coverage type bigWig color 123,31,31 priority 2202 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=ISOWT Group2=Ce view=COV ## Coverage track track ES1371_coverage parent NG173NE4320CeView1 on bigDataUrl ES1371_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel ISOWT_Ce ES1371 coverage longLabel ISOWT_Ce ES1371 coverage type bigWig color 123,31,31 priority 2204 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=ISOWT Group2=Ce view=COV ## Coverage track track ES1372_coverage parent NG173NE4320CeView1 on bigDataUrl ES1372_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel ISOWT_Ce ES1372 coverage longLabel ISOWT_Ce ES1372 coverage type bigWig color 123,31,31 priority 2206 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=ISOWT Group2=Ce view=COV ## Coverage track track ES1373_coverage parent NG173NE4320CeView1 on bigDataUrl ES1373_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel NE4320_Ce ES1373 coverage longLabel NE4320_Ce ES1373 coverage type bigWig color 141,102,0 priority 2208 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=NE4320 Group2=Ce view=COV ## Coverage track track ES1374_coverage parent NG173NE4320CeView1 on bigDataUrl ES1374_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel NE4320_Ce ES1374 coverage longLabel NE4320_Ce ES1374 coverage type bigWig color 141,102,0 priority 2210 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=NE4320 Group2=Ce view=COV ## Coverage track track ES1375_coverage parent NG173NE4320CeView1 on bigDataUrl ES1375_1.sickle.merged.cutadapt.topHat2pe_ce10.bw shortLabel NE4320_Ce ES1375 coverage longLabel NE4320_Ce ES1375 coverage type bigWig color 141,102,0 priority 2212 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=NE4320 Group2=Ce view=COV ## Views track for RNAseq, junctions data track NG173NE4320CeView2 parent NG173NE4320Ce shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on # combined junctions track track ES1370_junctions parent NG173NE4320CeView2 on bigDataUrl ES1370_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel ISOWT_Ce ES1370 junctions longLabel ISOWT_Ce ES1370 junctions type bigBed 12 visibility pack priority 2214 scoreMin 10 scoreMax 100 color 123,31,31 subGroups Group1=ISOWT Group2=Ce view=JUNC # combined junctions track track ES1371_junctions parent NG173NE4320CeView2 on bigDataUrl ES1371_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel ISOWT_Ce ES1371 junctions longLabel ISOWT_Ce ES1371 junctions type bigBed 12 visibility pack priority 2216 scoreMin 10 scoreMax 100 color 123,31,31 subGroups Group1=ISOWT Group2=Ce view=JUNC # combined junctions track track ES1372_junctions parent NG173NE4320CeView2 on bigDataUrl ES1372_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel ISOWT_Ce ES1372 junctions longLabel ISOWT_Ce ES1372 junctions type bigBed 12 visibility pack priority 2218 scoreMin 10 scoreMax 100 color 123,31,31 subGroups Group1=ISOWT Group2=Ce view=JUNC # combined junctions track track ES1373_junctions parent NG173NE4320CeView2 on bigDataUrl ES1373_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel NE4320_Ce ES1373 junctions longLabel NE4320_Ce ES1373 junctions type bigBed 12 visibility pack priority 2220 scoreMin 10 scoreMax 100 color 141,102,0 subGroups Group1=NE4320 Group2=Ce view=JUNC # combined junctions track track ES1374_junctions parent NG173NE4320CeView2 on bigDataUrl ES1374_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel NE4320_Ce ES1374 junctions longLabel NE4320_Ce ES1374 junctions type bigBed 12 visibility pack priority 2222 scoreMin 10 scoreMax 100 color 141,102,0 subGroups Group1=NE4320 Group2=Ce view=JUNC # combined junctions track track ES1375_junctions parent NG173NE4320CeView2 on bigDataUrl ES1375_1.sickle.merged.cutadapt.topHat2pe_ce10.sorted.bb shortLabel NE4320_Ce ES1375 junctions longLabel NE4320_Ce ES1375 junctions type bigBed 12 visibility pack priority 2224 scoreMin 10 scoreMax 100 color 141,102,0 subGroups Group1=NE4320 Group2=Ce view=JUNC # combined junctions track track ISOWT_Ce_junctions parent NG173NE4320CeView2 on bigDataUrl ISOWT_Ce.TopHat2_ce10.combinedJunctions.bb shortLabel ISOWT_Ce junctions longLabel ISOWT_Ce junctions type bigBed 12 visibility pack priority 2226 scoreMin 10 scoreMax 100 color 123,31,31 subGroups Group1=ISOWT Group2=Ce view=JUNC # combined junctions track track NE4320_Ce_junctions parent NG173NE4320CeView2 on bigDataUrl NE4320_Ce.TopHat2_ce10.combinedJunctions.bb shortLabel NE4320_Ce junctions longLabel NE4320_Ce junctions type bigBed 12 visibility pack priority 2228 scoreMin 10 scoreMax 100 color 141,102,0 subGroups Group1=NE4320 Group2=Ce view=JUNC