## RNA-seq data coverage track set track stumpoRnaseqSet compositeTrack on shortLabel Stumpo RNA-seq coverage, TopHat2 longLabel Stumpo RNA-seq coverage, TopHat2 type bigWig allButtonPair on centerLabelsDense on dragAndDrop on priority 833 alwaysZero on graphTypeDefault bar maxHeightPixels 100:40:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on viewLimits 0:200 visibility full ## RNA-seq data coverage tracks ## replicate 1 track siBrg1_r1 parent stumpoRnaseqSet on bigDataUrl ES638_merged.topHat2pe.bw shortLabel RNA-seq siBrg1_r1 longLabel RNA-seq siBrg1_r1 type bigWig color 176,32,36 priority 834 alwaysZero on graphTypeDefault bar maxHeightPixels 100:40:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on viewLimits 0:200 visibility full ## replicate 2 track siBrg1_r2 parent stumpoRnaseqSet on bigDataUrl ES639_merged.topHat2pe.bw shortLabel RNA-seq siBrg1_r2 longLabel RNA-seq siBrg1_r2 type bigWig color 176,32,36 priority 836 alwaysZero on graphTypeDefault bar maxHeightPixels 100:40:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on viewLimits 0:200 visibility full ## replicate 3 track siBrg1_r3 parent stumpoRnaseqSet on bigDataUrl ES640_merged.topHat2pe.bw shortLabel RNA-seq siBrg1_r3 longLabel RNA-seq siBrg1_r3 type bigWig color 176,32,36 priority 838 alwaysZero on graphTypeDefault bar maxHeightPixels 100:40:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on viewLimits 0:200 visibility full ## Control replicate 1 track Control_r1 parent stumpoRnaseqSet on bigDataUrl ES641_merged.topHat2pe.bw shortLabel RNA-seq Control_r1 longLabel RNA-seq Control_r1 type bigWig color 110,110,140 priority 840 alwaysZero on graphTypeDefault bar maxHeightPixels 100:40:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on viewLimits 0:200 visibility full ## Control replicate 2 track Control_r2 parent stumpoRnaseqSet on bigDataUrl ES642_merged.topHat2pe.bw shortLabel RNA-seq Control_r2 longLabel RNA-seq Control_r2 type bigWig color 110,110,140 priority 842 alwaysZero on graphTypeDefault bar maxHeightPixels 100:40:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on viewLimits 0:200 visibility full ## Control replicate 3 track Control_r3 parent stumpoRnaseqSet on bigDataUrl ES643_merged.topHat2pe.bw shortLabel RNA-seq Control_r3 longLabel RNA-seq Control_r3 type bigWig color 110,110,140 priority 844 alwaysZero on graphTypeDefault bar maxHeightPixels 100:40:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on viewLimits 0:200 visibility full # Union of coverages across replicates per sample group ## Union RNA-seq data coverage track set track StumpoRnaseqSiBrg1UnionSet compositeTrack on shortLabel Stumpo RNA-seq union coverage longLabel Stumpo RNA-seq union coverage type bigWig allButtonPair on centerLabelsDense on dragAndDrop on priority 853 alwaysZero on graphTypeDefault bar maxHeightPixels 100:40:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:200 visibility full ## RNA-seq data coverage tracks ## union coverage track siBrg1_union parent StumpoRnaseqSiBrg1UnionSet on bigDataUrl siBrg1_union.TopHat2pe.bw shortLabel RNA-seq siBrg1_union longLabel RNA-seq siBrg1_union type bigWig color 146,22,24 priority 854 alwaysZero on graphTypeDefault bar maxHeightPixels 100:40:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:200 visibility full ## Control union coverage track Control_union parent StumpoRnaseqSiBrg1UnionSet on bigDataUrl Control_union.TopHat2pe.bw shortLabel RNA-seq Control_union longLabel RNA-seq Control_union type bigWig color 90,90,110 priority 855 alwaysZero on graphTypeDefault bar maxHeightPixels 100:40:8 smoothingWindow 2 transformFunc NONE windowingFunction maximum gridDefault on autoScale on viewLimits 0:200 visibility full