## Beginning of track view track NG157WTSpleen compositeTrack on shortLabel NG157 WT Spleen longLabel NG157 WT Spleen priority 2200 visibility full type bed 3 configurable on subGroup1 view Views \ COV=Coverage \ PEAK=Peaks \ JUNC=Junctions subGroup2 Group1 Group1 \ WT_Spleen=WT_Spleen \ TTPKO_Spleen=TTPKO_Spleen sortOrder Group1=+ view=+ ## Views track coverage data track NG157WTSpleenView1 parent NG157WTSpleen shortLabel Coverage view COV visibility full type bigWig allButtonPair on centerLabelsDense on dragAndDrop on alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 viewUi on ## Coverage track track ES1240_coverage parent NG157WTSpleenView1 on bigDataUrl ES1240_1.merged.filt.fastq.STAR_mm10.sortedByCoord.bw shortLabel WT_Spleen ES1240 coverage longLabel WT_Spleen ES1240 coverage type bigWig color 207,73,82 priority 2202 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=WT_Spleen view=COV ## Coverage track track ES1241_coverage parent NG157WTSpleenView1 on bigDataUrl ES1241_1.merged.filt.fastq.STAR_mm10.sortedByCoord.bw shortLabel WT_Spleen ES1241 coverage longLabel WT_Spleen ES1241 coverage type bigWig color 199,58,68 priority 2204 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=WT_Spleen view=COV ## Coverage track track ES1242_coverage parent NG157WTSpleenView1 on bigDataUrl ES1242_1.merged.filt.fastq.STAR_mm10.sortedByCoord.bw shortLabel WT_Spleen ES1242 coverage longLabel WT_Spleen ES1242 coverage type bigWig color 191,45,55 priority 2206 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=WT_Spleen view=COV ## Coverage track track ES1243_coverage parent NG157WTSpleenView1 on bigDataUrl ES1243_1.merged.filt.fastq.STAR_mm10.sortedByCoord.bw shortLabel WT_Spleen ES1243 coverage longLabel WT_Spleen ES1243 coverage type bigWig color 177,26,36 priority 2208 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=WT_Spleen view=COV ## Coverage track track ES1244_coverage parent NG157WTSpleenView1 on bigDataUrl ES1244_1.merged.filt.fastq.STAR_mm10.sortedByCoord.bw shortLabel TTPKO_Spleen ES1244 coverage longLabel TTPKO_Spleen ES1244 coverage type bigWig color 250,166,46 priority 2210 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=TTPKO_Spleen view=COV ## Coverage track track ES1245_coverage parent NG157WTSpleenView1 on bigDataUrl ES1245_1.merged.filt.fastq.STAR_mm10.sortedByCoord.bw shortLabel TTPKO_Spleen ES1245 coverage longLabel TTPKO_Spleen ES1245 coverage type bigWig color 249,156,24 priority 2212 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=TTPKO_Spleen view=COV ## Coverage track track ES1246_coverage parent NG157WTSpleenView1 on bigDataUrl ES1246_1.merged.filt.fastq.STAR_mm10.sortedByCoord.bw shortLabel TTPKO_Spleen ES1246 coverage longLabel TTPKO_Spleen ES1246 coverage type bigWig color 248,147,3 priority 2214 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=TTPKO_Spleen view=COV ## Coverage track track ES1247_coverage parent NG157WTSpleenView1 on bigDataUrl ES1247_1.merged.filt.fastq.STAR_mm10.sortedByCoord.bw shortLabel TTPKO_Spleen ES1247 coverage longLabel TTPKO_Spleen ES1247 coverage type bigWig color 227,134,2 priority 2216 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=TTPKO_Spleen view=COV ## Coverage track track WT_Spleen_coverage parent NG157WTSpleenView1 on bigDataUrl WT_Spleen_union.STAR_mm10.bw shortLabel WT_Spleen coverage longLabel WT_Spleen coverage type bigWig color 162,10,20 priority 2218 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=WT_Spleen view=COV ## Coverage track track TTPKO_Spleen_coverage parent NG157WTSpleenView1 on bigDataUrl TTPKO_Spleen_union.STAR_mm10.bw shortLabel TTPKO_Spleen coverage longLabel TTPKO_Spleen coverage type bigWig color 205,121,1 priority 2220 alwaysZero on graphTypeDefault bar maxHeightPixels 100:60:8 smoothingWindow 2 transformFunc NONE windowingFunction mean+whiskers gridDefault on viewLimits 0:20 visibility hide subGroups Group1=TTPKO_Spleen view=COV ## Views track for RNAseq, junctions data track NG157WTSpleenView2 parent NG157WTSpleen shortLabel RNAseq_junctions view JUNC visibility pack type bigBed 12 allButtonPair on centerLabelsDense on dragAndDrop on thickDrawItem on scoreFilter 20 scoreFilterLimits 1:1000 viewUi on # combined junctions track track ES1240_junctions parent NG157WTSpleenView2 on bigDataUrl ES1240_1.merged.filt.fastq.STAR_mm10.sorted.bb shortLabel WT_Spleen ES1240 junctions longLabel WT_Spleen ES1240 junctions type bigBed 12 visibility pack priority 2222 scoreMin 10 scoreMax 100 color 207,73,82 subGroups Group1=WT_Spleen view=JUNC # combined junctions track track ES1241_junctions parent NG157WTSpleenView2 on bigDataUrl ES1241_1.merged.filt.fastq.STAR_mm10.sorted.bb shortLabel WT_Spleen ES1241 junctions longLabel WT_Spleen ES1241 junctions type bigBed 12 visibility pack priority 2224 scoreMin 10 scoreMax 100 color 199,58,68 subGroups Group1=WT_Spleen view=JUNC # combined junctions track track ES1242_junctions parent NG157WTSpleenView2 on bigDataUrl ES1242_1.merged.filt.fastq.STAR_mm10.sorted.bb shortLabel WT_Spleen ES1242 junctions longLabel WT_Spleen ES1242 junctions type bigBed 12 visibility pack priority 2226 scoreMin 10 scoreMax 100 color 191,45,55 subGroups Group1=WT_Spleen view=JUNC # combined junctions track track ES1243_junctions parent NG157WTSpleenView2 on bigDataUrl ES1243_1.merged.filt.fastq.STAR_mm10.sorted.bb shortLabel WT_Spleen ES1243 junctions longLabel WT_Spleen ES1243 junctions type bigBed 12 visibility pack priority 2228 scoreMin 10 scoreMax 100 color 177,26,36 subGroups Group1=WT_Spleen view=JUNC # combined junctions track track ES1244_junctions parent NG157WTSpleenView2 on bigDataUrl ES1244_1.merged.filt.fastq.STAR_mm10.sorted.bb shortLabel TTPKO_Spleen ES1244 junctions longLabel TTPKO_Spleen ES1244 junctions type bigBed 12 visibility pack priority 2230 scoreMin 10 scoreMax 100 color 250,166,46 subGroups Group1=TTPKO_Spleen view=JUNC # combined junctions track track ES1245_junctions parent NG157WTSpleenView2 on bigDataUrl ES1245_1.merged.filt.fastq.STAR_mm10.sorted.bb shortLabel TTPKO_Spleen ES1245 junctions longLabel TTPKO_Spleen ES1245 junctions type bigBed 12 visibility pack priority 2232 scoreMin 10 scoreMax 100 color 249,156,24 subGroups Group1=TTPKO_Spleen view=JUNC # combined junctions track track ES1246_junctions parent NG157WTSpleenView2 on bigDataUrl ES1246_1.merged.filt.fastq.STAR_mm10.sorted.bb shortLabel TTPKO_Spleen ES1246 junctions longLabel TTPKO_Spleen ES1246 junctions type bigBed 12 visibility pack priority 2234 scoreMin 10 scoreMax 100 color 248,147,3 subGroups Group1=TTPKO_Spleen view=JUNC # combined junctions track track ES1247_junctions parent NG157WTSpleenView2 on bigDataUrl ES1247_1.merged.filt.fastq.STAR_mm10.sorted.bb shortLabel TTPKO_Spleen ES1247 junctions longLabel TTPKO_Spleen ES1247 junctions type bigBed 12 visibility pack priority 2236 scoreMin 10 scoreMax 100 color 227,134,2 subGroups Group1=TTPKO_Spleen view=JUNC # combined junctions track track WT_Spleen_junctions parent NG157WTSpleenView2 on bigDataUrl WT_Spleen.STAR_mm10.combinedJunctions.sorted.bb shortLabel WT_Spleen junctions longLabel WT_Spleen junctions type bigBed 12 visibility pack priority 2238 scoreMin 10 scoreMax 100 color 162,10,20 subGroups Group1=WT_Spleen view=JUNC # combined junctions track track TTPKO_Spleen_junctions parent NG157WTSpleenView2 on bigDataUrl TTPKO_Spleen.STAR_mm10.combinedJunctions.sorted.bb shortLabel TTPKO_Spleen junctions longLabel TTPKO_Spleen junctions type bigBed 12 visibility pack priority 2240 scoreMin 10 scoreMax 100 color 205,121,1 subGroups Group1=TTPKO_Spleen view=JUNC