Information for motif2


Reverse Opposite:

p-value:1e-29
log p-value:-6.716e+01
Information Content per bp:1.805
Number of Target Sequences with motif403.0
Percentage of Target Sequences with motif27.34%
Number of Background Sequences with motif7643.5
Percentage of Background Sequences with motif15.73%
Average Position of motif in Targets2966.6 +/- 1697.8bp
Average Position of motif in Background3002.7 +/- 1750.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGTACCTTTC---
NNGCACCTTTCTCC

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------AGTACCTTTC-
ACTCCAAGTACTTGGAA

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGTACCTTTC---
-TGACCTTTNCNT

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGTACCTTTC-----
AAAGACCTGTCAATAC

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGTACCTTTC-----
AATTACCTGTCAATAC

MA0103.1_ZEB1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGTACCTTTC
--CACCTG--

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGTACCTTTC-----
AAGCACCTGTCAATAT

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGTACCTTTC-----
AACGAGCTGTCAATAC

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGTACCTTTC-----
AAAGACCTGTCAATCC

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTACCTTTC---
NNNNTGACCTTTNNNN