Information for motif20


Reverse Opposite:

p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.858
Number of Target Sequences with motif328.0
Percentage of Target Sequences with motif22.25%
Number of Background Sequences with motif7421.8
Percentage of Background Sequences with motif15.27%
Average Position of motif in Targets2881.2 +/- 1536.2bp
Average Position of motif in Background3027.6 +/- 1698.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGMTGATG-
-GCTGACGC

MA0035.1_Gata1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CGMTGATG-
---GGATGG

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGMTGATG----
RGATGATGCAAT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGMTGATG----
--ATGATGCAAT

PH0017.1_Cux1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGMTGATG----
TAATGATGATCACTA

MA0036.1_GATA2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGMTGATG
---GGATA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGMTGATG
-CATGAC-

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGMTGATG----
ATTTCCTTTGATCTATA

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGMTGATG----
AATCCCTTTGATCTATC

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGMTGATG-------
TNNNATGATTTCNNCNN