| p-value: | 1e-11 |
| log p-value: | -2.687e+01 |
| Information Content per bp: | 1.650 |
| Number of Target Sequences with motif | 884.0 |
| Percentage of Target Sequences with motif | 59.97% |
| Number of Background Sequences with motif | 24766.5 |
| Percentage of Background Sequences with motif | 50.95% |
| Average Position of motif in Targets | 3199.7 +/- 1681.0bp |
| Average Position of motif in Background | 3006.3 +/- 1758.5bp |
| Strand Bias (log2 ratio + to - strand density) | -0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.61 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 1 |
| Score: | 0.77
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GCACKTAA
AAGCACTTAA |
|
|
|
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq/Homer
| Match Rank: | 2 |
| Score: | 0.76
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GCACKTAA
BGCACGTA- |
|
|
|
PH0004.1_Nkx3-2/Jaspar
| Match Rank: | 3 |
| Score: | 0.75
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----GCACKTAA----
CATAACCACTTAACAAC |
|
|
|
PB0048.1_Nkx3-1_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.74
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----GCACKTAA----
CTTAACCACTTAAGGAT |
|
|
|
MA0122.1_Nkx3-2/Jaspar
| Match Rank: | 5 |
| Score: | 0.74
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GCACKTAA
NCCACTTAN |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq/Homer
| Match Rank: | 6 |
| Score: | 0.73
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GCACKTAA
AASCACTCAA |
|
|
|
HIF2a(HLH)/O785-HIF2a-ChIP-Seq(GSE34871)/Homer
| Match Rank: | 7 |
| Score: | 0.70
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GCACKTAA--
GCACGTACCC |
|
|
|
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
| Match Rank: | 8 |
| Score: | 0.70
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GCACKTAA
TBGCACGCAA |
|
|
|
PB0208.1_Zscan4_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.69
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GCACKTAA----
CGAAGCACACAAAATA |
|
|
|
PH0115.1_Nkx2-6/Jaspar
| Match Rank: | 10 |
| Score: | 0.69
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GCACKTAA----
TAAGCCACTTAACATT |
|
|
|
