Information for motif25


Reverse Opposite:

p-value:1e-10
log p-value:-2.405e+01
Information Content per bp:1.758
Number of Target Sequences with motif510.0
Percentage of Target Sequences with motif34.60%
Number of Background Sequences with motif13049.4
Percentage of Background Sequences with motif26.85%
Average Position of motif in Targets3235.9 +/- 1682.3bp
Average Position of motif in Background3006.4 +/- 1702.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GGGTACGG------
TTNGGGTACGCCNNANN

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GGGTACGG---
GCTGGGGGGTACCCCTT

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGTACGG
GGTAAGTA---

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GGGTACGG---
CTACTTGGATACGGAAT

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGTACGG--
NTGGGTGTGGCC

PB0027.1_Gmeb1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGTACGG-------
GAGTGTACGTAAGATGG

HIF2a(HLH)/O785-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGTACGG--
GGGTACGTGC

Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGTACGG-
TGGGTGTGGC

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGGTACGG------
TGCGCATAGGGGAGGAG

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GGGTACGG-
TACCCTAGTTACCGA