Information for motif31


Reverse Opposite:

p-value:1e-5
log p-value:-1.349e+01
Information Content per bp:1.922
Number of Target Sequences with motif414.0
Percentage of Target Sequences with motif28.09%
Number of Background Sequences with motif11087.5
Percentage of Background Sequences with motif22.81%
Average Position of motif in Targets2585.9 +/- 1844.7bp
Average Position of motif in Background3009.8 +/- 1749.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0032.1_FOXC1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AACTCTAC-----
-----TACTNNNN

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AACTCTAC--
GCAAAACATTACTA

MA0027.1_En1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AACTCTAC--
GANCACTACTT

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AACTCTAC
--ATCCAC

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AACTCTAC-------
ACATGCTACCTAATAC

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AACTCTAC-------
ACTTGCTACCTACACC

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AACTCTAC-
---GCTTCC

Nkx2.1(Homeobox)/H3122-NKX2.1-ChIP-Seq(GSE39998)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AACTCTAC
CCACTCAA-

MA0133.1_BRCA1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AACTCTAC
ACAACAC---

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AACTCTAC-------
CNNNGCTACTGTANNN