Information for motif33


Reverse Opposite:

p-value:1e-5
log p-value:-1.201e+01
Information Content per bp:1.488
Number of Target Sequences with motif202.0
Percentage of Target Sequences with motif13.70%
Number of Background Sequences with motif4901.2
Percentage of Background Sequences with motif10.08%
Average Position of motif in Targets3117.1 +/- 1683.6bp
Average Position of motif in Background3087.6 +/- 1741.5bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GYGTTGSBGTBT-
---CTGTGGTTTN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GYGTTGSBGTBT
--NNTGTGGTTT

MA0002.1_RUNX1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GYGTTGSBGTBT
-TATTGTGGTTA

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GYGTTGSBGTBT
GTGTTGN-----

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GYGTTGSBGTBT
--GCTGTGGTTT

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GYGTTGSBGTBT
-GTCTGTGGTTT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GYGTTGSBGTBT-
-NNHTGTGGTTWN

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GYGTTGSBGTBT-
NNNTGTTGTTGTTNG

MA0162.1_Egr1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GYGTTGSBGTBT
TGCGTGGGCGG--

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GYGTTGSBGTBT
NGCGTGGGCGGR-