Information for motif35


Reverse Opposite:

p-value:1e-3
log p-value:-7.706e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets3196.6 +/- 274.3bp
Average Position of motif in Background4134.8 +/- 537.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)19.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TAGTGGCACCGG---
NNNNTTGGCGCCGANNN

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGTGGCACCGG-----
NNTNCGCACCTGTNGAN

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TAGTGGCACCGG
---TGACACCT-

MA0122.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TAGTGGCACCGG
TTAAGTGGA-----

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TAGTGGCACCGG--
----NNCACCTGNN

MA0161.1_NFIC/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TAGTGGCACCGG
--TTGGCA----

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TAGTGGCACCGG---
NNNNTTGGCGCCGANNN

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TAGTGGCACCGG
TGCGGAGTGGGACTGG

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TAGTGGCACCGG---
ATAAATGACACCTATCA

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TAGTGGCACCGG
-----GCTCCG-