Information for motif36


Reverse Opposite:

p-value:1e-2
log p-value:-5.194e+00
Information Content per bp:1.530
Number of Target Sequences with motif167.0
Percentage of Target Sequences with motif11.33%
Number of Background Sequences with motif4532.9
Percentage of Background Sequences with motif9.33%
Average Position of motif in Targets3095.7 +/- 1469.3bp
Average Position of motif in Background3043.3 +/- 1729.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTGGTTA------
ANNNCTAGTTAACNGNN

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGGTTA-----
GAAAACTAGTTAACATC

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTGGTTA
HCAGCTGDTN-

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGCTGGTTA
NCAGCTGCTG-

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGGCTGGTTA-
---CTGTTTAC

SCL/HPC7-Scl-ChIP-Seq/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGCTGGTTA
CAGCTGNT--

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGGCTGGTTA
-NGCTN----

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTGGTTA-
GGNGCGNCTGTTNNN

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGCTGGTTA
CAGCTGTT--

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGGCTGGTTA
VNAVCAGCTGGC--