Information for motif41


Reverse Opposite:

p-value:1e0
log p-value:-2.009e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif21.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets577.8 +/- 339.6bp
Average Position of motif in Background3329.9 +/- 1832.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)31.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTAGCATTACAG------
-TCNCTTTACAGCGNNNT

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTAGCATTACAG------
-TCNNTTTACAGCGNNNT

MA0158.1_HOXA5/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GTAGCATTACAG
----AATTAGTG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTAGCATTACAG-
---GCATTCCAGN

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GTAGCATTACAG
NNNTTAGGTAGCNTNT---

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTAGCATTACAG-
---RCATTCCWGG

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------GTAGCATTACAG
ATTTACAGTAGCAAAA---

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GTAGCATTACAG
NNTGTAGGTAGCANNT---

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GTAGCATTACAG
ATGTACAGTAGCAAAG---

MA0132.1_Pdx1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTAGCATTACAG
----AATTAG--