Information for motif43


Reverse Opposite:

p-value:1e0
log p-value:-1.754e+00
Information Content per bp:1.530
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif1002.5
Percentage of Background Sequences with motif2.06%
Average Position of motif in Targets1575.2 +/- 1584.2bp
Average Position of motif in Background3080.8 +/- 1752.3bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)2.61
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTACAGAAAG--
--ACAGGAAGTG

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTACAGAAAG-
-AACAGGAAGT

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTACAGAAAG----
AAACAGACAAAGGAAT

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTACAGAAAG--
--ACAGGAAGTG

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTACAGAAAG-
-NACAGGAAAT

MA0052.1_MEF2A/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTACAGAAAG
CTATAAATAG

ETV1(ETS)/GIST48-ETV1-ChIP-Seq/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTACAGAAAG-
-AACCGGAAGT

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTACAGAAAG
--ACCGGAAG

MA0062.1_GABPA/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTACAGAAAG--
--ACCGGAAGAG

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTACAGAAAG-
GAAAGTGAAAGT