Information for motif6


Reverse Opposite:

p-value:1e-22
log p-value:-5.199e+01
Information Content per bp:1.811
Number of Target Sequences with motif444.0
Percentage of Target Sequences with motif30.12%
Number of Background Sequences with motif9397.3
Percentage of Background Sequences with motif19.33%
Average Position of motif in Targets3017.0 +/- 1760.1bp
Average Position of motif in Background3013.9 +/- 1752.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box/HPC7-Scl-ChIP-Seq/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGCTTCA-
CAGCTGTTTCCT

MyoD(HLH)/Myotube-MyoD-ChIP-Seq/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCTTCA
AGCAGCTGCTNN-

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:AGCTGCTTCA
----GCTTCC

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGCTGCTTCA
NCAGCTGCTG--

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------AGCTGCTTCA-
CTCAGCAGCTGCTACTG

SCL/HPC7-Scl-ChIP-Seq/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGCTTCA
CAGCTGNT---

MA0048.1_NHLH1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGCTGCTTCA
GCGCAGCTGCGT--

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGCTTCA
CAGCTGTT---

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGCTGCTTCA
HCAGCTGDTN--

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCTGCTTCA
TGCTGAGTCA