Information for motif7


Reverse Opposite:

p-value:1e-21
log p-value:-4.928e+01
Information Content per bp:1.970
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets3260.0 +/- 767.5bp
Average Position of motif in Background4273.3 +/- 1240.5bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCGACATCCAT
-GCCACACCCA-

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGCGACATCCAT---
---GYCATCMATCAT

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCGACATCCAT
TTGCAACATN---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCGACATCCAT
GGCCACACCCAN

MA0095.1_YY1/Jaspar

Match Rank:5
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGCGACATCCAT-
-------GCCATC

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGCGACATCCAT------
----ACATTCATGACACG

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCGACATCCAT
-AAGATATCCTT

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCGACATCCAT-
-ACCACATCCTGT

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGCGACATCCAT--
----DGATCRATAN

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGCGACATCCAT------
--GAAGATCAATCACTAA