Information for motif12


Reverse Opposite:

p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.913
Number of Target Sequences with motif278.0
Percentage of Target Sequences with motif23.19%
Number of Background Sequences with motif7661.8
Percentage of Background Sequences with motif15.85%
Average Position of motif in Targets3000.6 +/- 1798.3bp
Average Position of motif in Background3023.3 +/- 1743.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTACC--
NNACTTACCTN

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCCTTACC----
TCTTTGGCGTACCCTAA

Gata1(Zf)/K562-GATA1-ChIP-Seq/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCCTTACC--
NCCTTATCTG

Gata2(Zf)/K562-GATA2-ChIP-Seq/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCTTACC--
NNCTTATCTN

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTACC
NGGGATTA--

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCCTTACC---
-YCTTATCWVN

MA0101.1_REL/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCTTACC
GGGGATTTCC

MA0032.1_FOXC1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCTTACC----
----TACTNNNN

MA0080.1_SPI1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCTTACC
--CTTCCN

MA0035.2_Gata1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCTTACC---
NNCTTATCTGN