Information for motif13


Reverse Opposite:

p-value:1e-10
log p-value:-2.337e+01
Information Content per bp:1.936
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif25.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets1828.9 +/- 1248.6bp
Average Position of motif in Background2883.6 +/- 1544.3bp
Strand Bias (log2 ratio + to - strand density)3.9
Multiplicity (# of sites on avg that occur together)2.91
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGCCTTAGTCAA-
ATTGCCTGAGGCAAT

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTTAGTCAA-
ANTGCCTGAGGCAAN

MA0099.2_AP1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CGCCTTAGTCAA
----TGAGTCA-

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCCTTAGTCAA
-TGCTGAGTCA-

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGCCTTAGTCAA
--GATGAGTCAT

MA0099.1_Fos/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGCCTTAGTCAA
----TGACTCAC

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTTAGTCAA-
NTCGCCTCAGGCAAT

MA0150.1_NFE2L2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGCCTTAGTCAA
-TGCTGAGTCAT

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGCCTTAGTCAA-
-GCCTCAGGGCAT

MA0047.2_Foxa2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGCCTTAGTCAA--
--NCTAAGTAAACA