Information for motif16


Reverse Opposite:

p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.901
Number of Target Sequences with motif356.0
Percentage of Target Sequences with motif29.69%
Number of Background Sequences with motif10768.9
Percentage of Background Sequences with motif22.28%
Average Position of motif in Targets3054.5 +/- 1758.5bp
Average Position of motif in Background3000.0 +/- 1778.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GTAGGCCT
CNAGGCCT

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GTAGGCCT
CTAGGCCT

MA0146.1_Zfx/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTAGGCCT-------
-CAGGCCNNGGCCNN

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGGCCT----
TTNGGGTACGCCNNANN

MA0032.1_FOXC1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GTAGGCCT
GGTAAGTA-----

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAGGCCT------
CAAAGGCGTGGCCAG

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTAGGCCT----
--TGACCTTGAN

MA0072.1_RORA_2/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GTAGGCCT-
TATAAGTAGGTCAA

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGGCCT---
NGTAGGTTGGCATNNN

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GTAGGCCT----
--TGACCTTGAV