Information for motif23


Reverse Opposite:

p-value:1e-7
log p-value:-1.688e+01
Information Content per bp:1.725
Number of Target Sequences with motif385.0
Percentage of Target Sequences with motif32.11%
Number of Background Sequences with motif12183.3
Percentage of Background Sequences with motif25.20%
Average Position of motif in Targets3047.5 +/- 1667.1bp
Average Position of motif in Background2974.2 +/- 1737.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--RTTCRTARGR--
ACATTCATGACACG

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------RTTCRTARGR-
GACCACATTCATACAAT

STAT6(Stat)/CD4-Stat6-ChIP-Seq/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RTTCRTARGR---
-TTCTNNAGAANT

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------RTTCRTARGR
ATGGAAAGTCGTAAAA

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----RTTCRTARGR--
AAAATATGCATAATAAA

PB0027.1_Gmeb1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----RTTCRTARGR---
GAGTGTACGTAAGATGG

MA0124.1_NKX3-1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RTTCRTARGR
ATACTTA---

STAT6/Macrophage-Stat6-ChIP-Seq/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RTTCRTARGR-
-TTCTNMGGAA

MA0033.1_FOXL1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-RTTCRTARGR
TATACATA---

MA0025.1_NFIL3/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---RTTCRTARGR
ANGTTACATAA--