Information for motif25


Reverse Opposite:

p-value:1e-6
log p-value:-1.546e+01
Information Content per bp:1.968
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif6.84%
Number of Background Sequences with motif1801.2
Percentage of Background Sequences with motif3.73%
Average Position of motif in Targets2902.1 +/- 1496.2bp
Average Position of motif in Background2984.3 +/- 1709.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.54
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:AATGTGGGAA--
--CSTGGGAAAD

PB0162.1_Sfpi1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AATGTGGGAA--
CAAATTCCGGAACC

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AATGTGGGAA-
-AGGTGTGAAM

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AATGTGGGAA----
GAAAAGGTGTGAAAATT

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AATGTGGGAA
NATGTTGCAA

MA0080.1_SPI1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AATGTGGGAA-
-----CGGAAG

Eomes(T-box)/H9-Eomes-ChIP-Seq/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AATGTGGGAA-
-AGGTGTTAAN

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AATGTGGGAA--
--GGCGGGAARN

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AATGTGGGAA---
NNNNATGCGGGTNNNN

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AATGTGGGAA--
RGSMTBCTGGGAAAT