Information for motif3


Reverse Opposite:

p-value:1e-18
log p-value:-4.291e+01
Information Content per bp:1.786
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif7.67%
Number of Background Sequences with motif1261.7
Percentage of Background Sequences with motif2.61%
Average Position of motif in Targets2868.0 +/- 1578.3bp
Average Position of motif in Background3035.3 +/- 1713.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/Promoter/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCGCWTCWWC
GTGCGCATGCGC

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCGCWTCWWC--
ANCGCGCGCCCTTNN

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCWTCWWC
NTCGCGCGCCTTNNN

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------GCGCWTCWWC
NCANGCGCGCGCGCCA--

NRF1(NRF)/MCF7-NRF1-ChIP-Seq/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCGCWTCWWC
CTGCGCATGCGC

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCGCWTCWWC
--GCTTCC--

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCWTCWWC
NNGCNCTGCGCGGC---

MA0117.1_Mafb/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCGCWTCWWC
--NCGTCAGC

MA0018.1_CREB1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCGCWTCWWC---
-NACGTCACCANG

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCGCWTCWWC-
-CACTTCCTCT