Information for motif30


Reverse Opposite:

p-value:1e-5
log p-value:-1.272e+01
Information Content per bp:1.965
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif534.6
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets2482.9 +/- 1779.3bp
Average Position of motif in Background2974.6 +/- 1734.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GGTCCTTTCA--
NNGCACCTTTCTCC

PB0083.1_Tcf7_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTCCTTTCA------
NNTTCCTTTGATCTNNA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGTCCTTTCA---
---CCTTTGATGT

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTCCTTTCA--
TGACCTTTNCNT

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGTCCTTTCA----
AAGCACCTGTCAATAT

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTCCTTTCA------
AATCCCTTTGATCTATC

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTCCTTTCA------
ATTTCCTTTGATCTATA

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGTCCTTTCA------
NNTTCCTTTGATCTANA

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGTCCTTTCA--
NNNNTGACCTTTNNNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTCCTTTCA--
--TGGTTTCAGT