| p-value: | 1e-4 |
| log p-value: | -1.151e+01 |
| Information Content per bp: | 1.962 |
| Number of Target Sequences with motif | 6.0 |
| Percentage of Target Sequences with motif | 0.50% |
| Number of Background Sequences with motif | 19.1 |
| Percentage of Background Sequences with motif | 0.04% |
| Average Position of motif in Targets | 3335.5 +/- 419.1bp |
| Average Position of motif in Background | 3046.7 +/- 1379.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 6.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq/Homer
| Match Rank: | 1 |
| Score: | 0.63
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | ACGCAGGCACTC--
----AASCACTCAA |
|
|
|
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 2 |
| Score: | 0.62
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | ACGCAGGCACTC--
----AAGCACTTAA |
|
|
|
Nkx2.1(Homeobox)/H3122-NKX2.1-ChIP-Seq(GSE39998)/Homer
| Match Rank: | 3 |
| Score: | 0.60
| | Offset: | 6
| | Orientation: | forward strand |
| Alignment: | ACGCAGGCACTC--
------CCACTCAA |
|
|
|
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
| Match Rank: | 4 |
| Score: | 0.58
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | ACGCAGGCACTC
TBGCACGCAA-- |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq/Homer
| Match Rank: | 5 |
| Score: | 0.57
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | ACGCAGGCACTC--
--NCTGTCAATCAN |
|
|
|
PB0130.1_Gm397_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --ACGCAGGCACTC--
AGCGGCACACACGCAA |
|
|
|
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq/Homer
| Match Rank: | 7 |
| Score: | 0.55
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | ACGCAGGCACTC
-NACAGGAAAT- |
|
|
|
MA0122.1_Nkx3-2/Jaspar
| Match Rank: | 8 |
| Score: | 0.55
| | Offset: | 5
| | Orientation: | reverse strand |
| Alignment: | ACGCAGGCACTC--
-----NCCACTTAN |
|
|
|
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
| Match Rank: | 9 |
| Score: | 0.55
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | ACGCAGGCACTC
--CCAGGAACAG |
|
|
|
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
| Match Rank: | 10 |
| Score: | 0.54
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | ACGCAGGCACTC-
-GSCTGTCACTCA |
|
|
|
