Information for motif32


Reverse Opposite:

p-value:1e-4
log p-value:-1.050e+01
Information Content per bp:1.530
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif208.9
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets1424.9 +/- 1092.0bp
Average Position of motif in Background3120.7 +/- 1699.6bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)2.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq/Homer

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCATAGACC
ATTTGCATAT---

PH0145.1_Pou2f3/Jaspar

Match Rank:2
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATAGACC
TNTAATTTGCATACNA-

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATAGACC
TNTAATTTGCATANNN-

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGCATAGACC
ATTTGCATAA---

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TGCATAGACC-
AAAATATGCATAATAAA

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGCATAGACC
TATACATA----

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TGCATAGACC-
CAGATGTGCACATACGT

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq/Homer

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGCATAGACC-
CANAGNNCAAAGTCCA

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGCATAGACC---
TATCATTAGAACGCT

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCATAGACC-------
NNANTTGACCCCTNNNN