Information for motif33


Reverse Opposite:

p-value:1e-4
log p-value:-9.513e+00
Information Content per bp:1.919
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif69.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets2655.9 +/- 681.4bp
Average Position of motif in Background2928.4 +/- 1673.6bp
Strand Bias (log2 ratio + to - strand density)-3.8
Multiplicity (# of sites on avg that occur together)5.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0024.1_E2F1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TACKCCAAAGAC
-GCGCCAAA---

PB0006.1_Bcl6b_1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TACKCCAAAGAC
NNNATTCCTCGAAAGN-

Tcf3(HMG)/mES-Tcf3-ChIP-Seq/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TACKCCAAAGAC
-ACATCAAAGG-

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TACKCCAAAGAC
-ACWTCAAAGG-

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TACKCCAAAGAC-
ATTTACGACAAATAGC

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TACKCCAAAGAC-
-ACATCAAAGGNA

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TACKCCAAAGAC
TTNGGGTACGCCNNANN-

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TACKCCAAAGAC--
TACTGGAAAAAAAA

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TACKCCAAAGAC---
TATAGATCAAAGGAAAA

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----TACKCCAAAGAC
AAGCATACGCCCAACTT