Information for motif36


Reverse Opposite:

p-value:1e-3
log p-value:-8.794e+00
Information Content per bp:1.530
Number of Target Sequences with motif521.0
Percentage of Target Sequences with motif43.45%
Number of Background Sequences with motif18518.2
Percentage of Background Sequences with motif38.30%
Average Position of motif in Targets2985.8 +/- 1636.9bp
Average Position of motif in Background3049.5 +/- 1799.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATGGGAGCCCCG--
TTGGGGGCGCCCCTAG

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATGGGAGCCCCG
--CGGAGC----

Znf263(Zf)/K562-Znf263-ChIP-Seq/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATGGGAGCCCCG
--GGGAGGACNG

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGAGCCCCG----
NNNNTGAGCACTGTNNG

MA0105.1_NFKB1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATGGGAGCCCCG
-GGGGATTCCCC

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATGGGAGCCCCG---
NNNNGGTACCCCCCANN

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATGGGAGCCCCG--
NTNNNAGGAGTCTCNTN

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATGGGAGCCCCG
----CAGCC---

MA0095.1_YY1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGAGCCCCG
GATGGC-------

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:ATGGGAGCCCCG-----
-----GGCCCCGCCCCC