Information for motif37


Reverse Opposite:

p-value:1e-3
log p-value:-8.265e+00
Information Content per bp:1.955
Number of Target Sequences with motif115.0
Percentage of Target Sequences with motif9.59%
Number of Background Sequences with motif3328.1
Percentage of Background Sequences with motif6.88%
Average Position of motif in Targets2544.6 +/- 1889.1bp
Average Position of motif in Background3052.6 +/- 1747.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----ACTCGTTA-----
GAAAACTAGTTAACATC

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----ACTCGTTA----
TTGAAAACCGTTAATTT

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ACTCGTTA----
ATGGAAACCGTTATTTT

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACTCGTTA-----
AAACCTCGTAAAATTT

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGTTA---
NTTATTCGTCATNC

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ACTCGTTA-----
NNNACCTCATTATCNTN

PH0168.1_Hnf1b/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGTTA------
ANNNCTAGTTAACNGNN

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ACTCGTTA-----
GCAACCTCATTATNNNN

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACTCGTTA--
ATGGAAAGTCGTAAAA

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTCGTTA-----
AAAGCTCGTAAAATTT