Information for motif45


Reverse Opposite:

p-value:1e0
log p-value:-1.964e+00
Information Content per bp:1.983
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif52.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets2498.1 +/- 780.9bp
Average Position of motif in Background3441.4 +/- 1664.8bp
Strand Bias (log2 ratio + to - strand density)5.5
Multiplicity (# of sites on avg that occur together)15.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTGAGGGAGTAG--
----GGGAGGACNG

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGAGGGAGTAG
-AGAGGAAGTG-

MA0080.2_SPI1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGAGGGAGTAG
---AGGAAGT--

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGAGGGAGTAG-----
-AGGGGGATTAGCTGCC

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGAGGGAGTAG-----
NNAAGGGATTAACGANT

CRX(Homeobox)/Retina-Crx-ChIP-Seq/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTGAGGGAGTAG-
-----GGATTAGC

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGAGGGAGTAG----
TTAGAGGGATTAACAAT

MA0032.1_FOXC1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTGAGGGAGTAG
---GGTAAGTA-

AP2gamma(AP2)/MCF7-TFAP2c-ChIP-Seq/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGGGAGTAG
TGCCCTGAGGGCANN-

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGAGGGAGTAG----
TGAGGGGGATTAACTAT