Information for motif6


Reverse Opposite:

p-value:1e-15
log p-value:-3.601e+01
Information Content per bp:1.713
Number of Target Sequences with motif283.0
Percentage of Target Sequences with motif23.60%
Number of Background Sequences with motif7097.4
Percentage of Background Sequences with motif14.68%
Average Position of motif in Targets2763.3 +/- 1597.9bp
Average Position of motif in Background3115.6 +/- 1770.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(HLH)/O785-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TCWCGTCG--
GCACGTACCC

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCWCGTCG
BGCACGTA-

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCWCGTCG-
-CACGTGGN

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCWCGTCG
GCACGTNC

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCWCGTCG--------
-TCCGTCGCTTAAAAG

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCWCGTCG
TGACGT--

PB0131.1_Gmeb1_2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCWCGTCG----
TNAACGACGTCGNCCA

n-Myc(HLH)/mES-nMyc-ChIP-Seq/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCWCGTCG
NNCCACGTGG

USF1(HLH)/GM12878-Usf1-ChIP-Seq/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCWCGTCG
GGTCACGTGA

MA0093.1_USF1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCWCGTCG
-CACGTGG