Information for motif9


Reverse Opposite:

p-value:1e-12
log p-value:-2.952e+01
Information Content per bp:1.884
Number of Target Sequences with motif750.0
Percentage of Target Sequences with motif62.55%
Number of Background Sequences with motif25166.2
Percentage of Background Sequences with motif52.06%
Average Position of motif in Targets3139.9 +/- 1731.2bp
Average Position of motif in Background3009.5 +/- 1747.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.73
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0164.1_Nr2e3/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAACTTGT
AAGCTTG-

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAACTTGT------
AAAATTGTTATGAA

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAACTTGT------
GGAAAAATTGTTAGGAA

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AAACTTGT----
ATGGAAAGTCGTAAAA

MA0109.1_Hltf/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAACTTGT--
AACCTTATAT

POL005.1_DPE/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAACTTGT-
GAAGATGTT

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAACTTGT------
AATATACATGTAAAATT

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAACTTGT------
AATATACATGTAAAACA

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAACTTGT----
GAAAAAATTGCAAGG

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAACTTGT------
TAAATACATGTAAAATT