Details for gene set BIOCARTA_HDAC_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	KO_vs_WT.KO_vs_WT.cls#KO_versus_WT.KO_vs_WT.cls#KO_versus_WT_repos
Phenotype	KO_vs_WT.cls#KO_versus_WT_repos
Upregulated in class	WT
GeneSet	BIOCARTA_HDAC_PATHWAY
Enrichment Score (ES)	-0.3280756
Normalized Enrichment Score (NES)	-1.1239392
Nominal p-value	0.31262136
FDR q-value	1.0
FWER p-Value	0.956

Fig 1: Enrichment plot: BIOCARTA_HDAC_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Igf1	Igf1	714	0.982	0.1355	No
2	Myod1	Myod1	6536	0.268	-0.0519	No
3	Pik3ca	Pik3ca	7134	0.238	-0.0360	No
4	Pik3cg	Pik3cg	7381	0.227	-0.0079	No
5	Ppp3cc	Ppp3cc	9779	0.127	-0.0822	No
6	Insr	Insr	10570	0.096	-0.0977	No
7	Igf1r	Igf1r	10752	0.089	-0.0901	No
8	Cabin1	Cabin1	11287	0.069	-0.0999	No
9	Mapk7	Mapk7	11352	0.067	-0.0913	No
10	Nfatc2	Nfatc2	15074	-0.066	-0.2287	No
11	Ywhah	Ywhah	15454	-0.079	-0.2307	No
12	Calm1	Calm1	15695	-0.088	-0.2255	No
13	Map2k6	Map2k6	17471	-0.155	-0.2704	No
14	Calm3	Calm3	17745	-0.166	-0.2535	No
15	Nfatc1	Nfatc1	19617	-0.251	-0.2862	Yes
16	Akt1	Akt1	19946	-0.268	-0.2545	Yes
17	Camk2a	Camk2a	20094	-0.276	-0.2144	Yes
18	Hdac5	Hdac5	20246	-0.283	-0.1731	Yes
19	Pik3r1	Pik3r1	20403	-0.293	-0.1304	Yes
20	Ppp3ca	Ppp3ca	22485	-0.441	-0.1399	Yes
21	Ppp3cb	Ppp3cb	24135	-0.706	-0.0877	Yes
22	Mapk14	Mapk14	24295	-0.757	0.0324	Yes

Fig 2: BIOCARTA_HDAC_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_HDAC_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_HDAC_PATHWAY