Details for gene set BIOCARTA_PDGF_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	KO_vs_WT.KO_vs_WT.cls#KO_versus_WT.KO_vs_WT.cls#KO_versus_WT_repos
Phenotype	KO_vs_WT.cls#KO_versus_WT_repos
Upregulated in class	WT
GeneSet	BIOCARTA_PDGF_PATHWAY
Enrichment Score (ES)	-0.3063071
Normalized Enrichment Score (NES)	-1.057628
Nominal p-value	0.36328125
FDR q-value	1.0
FWER p-Value	0.974

Fig 1: Enrichment plot: BIOCARTA_PDGF_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Jun	Jun	2818	0.539	-0.0349	No
2	Pdgfra	Pdgfra	3001	0.518	0.0323	No
3	Prkcb	Prkcb	4979	0.359	0.0051	No
4	Pik3ca	Pik3ca	7134	0.238	-0.0466	No
5	Pik3cg	Pik3cg	7381	0.227	-0.0238	No
6	Fos	Fos	8808	0.166	-0.0568	No
7	Sos1	Sos1	9483	0.139	-0.0637	No
8	Shc1	Shc1	11228	0.071	-0.1231	No
9	Srf	Srf	11345	0.067	-0.1181	No
10	Elk1	Elk1	14138	-0.032	-0.2248	No
11	Map2k1	Map2k1	14564	-0.047	-0.2350	No
12	Hras	Hras	15263	-0.073	-0.2523	No
13	Csnk2a2	Csnk2a2	16082	-0.102	-0.2703	No
14	Map3k1	Map3k1	16987	-0.136	-0.2867	Yes
15	Grb2	Grb2	17172	-0.143	-0.2734	Yes
16	Stat1	Stat1	17229	-0.146	-0.2547	Yes
17	Pdgfa	Pdgfa	18127	-0.184	-0.2641	Yes
18	Plcg1	Plcg1	18355	-0.193	-0.2453	Yes
19	Rasa1	Rasa1	18958	-0.219	-0.2378	Yes
20	Mapk3	Mapk3	19068	-0.224	-0.2099	Yes
21	Mapk8	Mapk8	19234	-0.232	-0.1832	Yes
22	Prkca	Prkca	19435	-0.241	-0.1566	Yes
23	Csnk2a1	Csnk2a1	20343	-0.289	-0.1512	Yes
24	Pik3r1	Pik3r1	20403	-0.293	-0.1115	Yes
25	Stat5a	Stat5a	20939	-0.322	-0.0864	Yes
26	Map2k4	Map2k4	21120	-0.334	-0.0455	Yes
27	Stat3	Stat3	21544	-0.364	-0.0101	Yes
28	Raf1	Raf1	22482	-0.440	0.0158	Yes
29	Jak1	Jak1	23798	-0.618	0.0522	Yes

Fig 2: BIOCARTA_PDGF_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_PDGF_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_PDGF_PATHWAY