Details for gene set BIOCARTA_TGFB_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	KO_vs_WT.KO_vs_WT.cls#KO_versus_WT.KO_vs_WT.cls#KO_versus_WT_repos
Phenotype	KO_vs_WT.cls#KO_versus_WT_repos
Upregulated in class	KO
GeneSet	BIOCARTA_TGFB_PATHWAY
Enrichment Score (ES)	0.42117187
Normalized Enrichment Score (NES)	1.2077551
Nominal p-value	0.29166666
FDR q-value	0.68542325
FWER p-Value	0.919

Fig 1: Enrichment plot: BIOCARTA_TGFB_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tgfb2	Tgfb2	225	1.418	0.2546	Yes
2	Tgfb3	Tgfb3	691	0.995	0.4212	Yes
3	Apc	Apc	3535	0.468	0.3948	No
4	Cdh1	Cdh1	5438	0.331	0.3806	No
5	Map3k7	Map3k7	7775	0.209	0.3264	No
6	Tgfbr2	Tgfbr2	8044	0.197	0.3523	No
7	Skil	Skil	8085	0.195	0.3870	No
8	Tgfbr1	Tgfbr1	11471	0.063	0.2637	No
9	Map2k1	Map2k1	14564	-0.047	0.1493	No
10	Ep300	Ep300	14962	-0.062	0.1449	No
11	Tgfb1	Tgfb1	16549	-0.120	0.1039	No
12	Smad7	Smad7	17084	-0.140	0.1086	No
13	Smad2	Smad2	18025	-0.179	0.1044	No
14	Smad4	Smad4	18940	-0.219	0.1087	No
15	Mapk3	Mapk3	19068	-0.224	0.1453	No
16	Crebbp	Crebbp	19683	-0.255	0.1682	No
17	Smad3	Smad3	19749	-0.258	0.2135	No

Fig 2: BIOCARTA_TGFB_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_TGFB_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_TGFB_PATHWAY