Details for gene set REACTOME_REGULATION_OF_ENDOGENOUS_RETROELEMENTS[GSEA]

Table: GSEA Results Summary

Dataset	KO_vs_WT.KO_vs_WT.cls#KO_versus_WT.KO_vs_WT.cls#KO_versus_WT_repos
Phenotype	KO_vs_WT.cls#KO_versus_WT_repos
Upregulated in class	KO
GeneSet	REACTOME_REGULATION_OF_ENDOGENOUS_RETROELEMENTS
Enrichment Score (ES)	0.59888774
Normalized Enrichment Score (NES)	1.6389703
Nominal p-value	0.032258064
FDR q-value	0.6954884
FWER p-Value	0.919

Fig 1: Enrichment plot: REACTOME_REGULATION_OF_ENDOGENOUS_RETROELEMENTS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Zfp1007	Zfp1007	271	1.337	0.0317	Yes
2	H3c7	H3c7	587	1.051	0.0525	Yes
3	H2bc8	H2bc8	636	1.025	0.0832	Yes
4	H2bc6	H2bc6	652	1.014	0.1149	Yes
5	H2ac10	H2ac10	724	0.979	0.1432	Yes
6	H2ac6	H2ac6	726	0.979	0.1743	Yes
7	4930522L14Rik	4930522L14Rik	816	0.944	0.2007	Yes
8	H3c6	H3c6	862	0.927	0.2284	Yes
9	Zfp937	Zfp937	1244	0.799	0.2386	Yes
10	H4c8	H4c8	1258	0.795	0.2634	Yes
11	H4c3	H4c3	1304	0.783	0.2865	Yes
12	H2aj	H2aj	1305	0.782	0.3114	Yes
13	Gm14399	Gm14399	1374	0.762	0.3329	Yes
14	H2bc13	H2bc13	1582	0.716	0.3474	Yes
15	BC024063	BC024063	1833	0.674	0.3589	Yes
16	H2ac7	H2ac7	1993	0.649	0.3732	Yes
17	H3c15	H3c15	1998	0.647	0.3936	Yes
18	Zfp950	Zfp950	2157	0.624	0.4072	Yes
19	H3c11	H3c11	2275	0.607	0.4218	Yes
20	H2bc15	H2bc15	2459	0.582	0.4330	Yes
21	H2bc4	H2bc4	2570	0.570	0.4467	Yes
22	H4c4	H4c4	2809	0.540	0.4544	Yes
23	Zfp976	Zfp976	2924	0.525	0.4665	Yes
24	Zfp677	Zfp677	3049	0.513	0.4779	Yes
25	H3c4	H3c4	3131	0.505	0.4907	Yes
26	H4c14	H4c14	3193	0.498	0.5041	Yes
27	Zfp454	Zfp454	3235	0.493	0.5182	Yes
28	H4c1	H4c1	3255	0.492	0.5331	Yes
29	H2bc3	H2bc3	3330	0.486	0.5456	Yes
30	Zfp442	Zfp442	3362	0.483	0.5597	Yes
31	H4c11	H4c11	3463	0.475	0.5708	Yes
32	Gm3604	Gm3604	3498	0.472	0.5845	Yes
33	H4c9	H4c9	3797	0.444	0.5867	Yes
34	Gm5141	Gm5141	3843	0.441	0.5989	Yes
35	Zfp932	Zfp932	4200	0.413	0.5978	No
36	H3c8	H3c8	4530	0.389	0.5970	No
37	Zfp873	Zfp873	5593	0.321	0.5648	No
38	Zfp354a	Zfp354a	6025	0.297	0.5571	No
39	Zfp382	Zfp382	6089	0.293	0.5639	No
40	Gm15446	Gm15446	6323	0.280	0.5634	No
41	Zfp960	Zfp960	6426	0.274	0.5681	No
42	Zfp934	Zfp934	7034	0.243	0.5516	No
43	H2ac8	H2ac8	7131	0.238	0.5553	No
44	Zfp53	Zfp53	7265	0.232	0.5574	No
45	H4c6	H4c6	7806	0.208	0.5424	No
46	Atf7ip	Atf7ip	7817	0.207	0.5486	No
47	H2bc26	H2bc26	8106	0.194	0.5433	No
48	H2bc11	H2bc11	8374	0.184	0.5385	No
49	Zfp54	Zfp54	8738	0.168	0.5293	No
50	Zfp97	Zfp97	8796	0.166	0.5323	No
51	Zfp324	Zfp324	8935	0.161	0.5319	No
52	H2ac19	H2ac19	9696	0.130	0.5057	No
53	Zfp975	Zfp975	10434	0.101	0.4795	No
54	H3c2	H3c2	11349	0.067	0.4451	No
55	H4c12	H4c12	13836	-0.021	0.3465	No
56	H4c16	H4c16	14184	-0.034	0.3337	No
57	Trim28	Trim28	14825	-0.057	0.3100	No
58	H2bc9	H2bc9	16136	-0.104	0.2609	No
59	H3f3b	H3f3b	16446	-0.115	0.2523	No
60	Zfp317	Zfp317	16638	-0.122	0.2485	No
61	H2ax	H2ax	18012	-0.178	0.1994	No
62	Setdb1	Setdb1	18633	-0.206	0.1811	No
63	H2az2	H2az2	19504	-0.244	0.1542	No
64	H3f3a	H3f3a	19922	-0.267	0.1460	No
65	Zfp160	Zfp160	20682	-0.308	0.1255	No
66	Zfp433	Zfp433	20874	-0.319	0.1280	No
67	Zfp970	Zfp970	21532	-0.363	0.1133	No
68	Gm10778	Gm10778	21567	-0.365	0.1235	No
69	H2bc21	H2bc21	23472	-0.560	0.0653	No

Fig 2: REACTOME_REGULATION_OF_ENDOGENOUS_RETROELEMENTS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: REACTOME_REGULATION_OF_ENDOGENOUS_RETROELEMENTS: Random ES distribution   
Gene set null distribution of ES for REACTOME_REGULATION_OF_ENDOGENOUS_RETROELEMENTS