DatasetKO_vs_WT.KO_vs_WT.cls#KO_versus_WT.KO_vs_WT.cls#KO_versus_WT_repos
PhenotypeKO_vs_WT.cls#KO_versus_WT_repos
Upregulated in classKO
GeneSetREACTOME_TRANSCRIPTIONAL_REGULATION_BY_RUNX1
Enrichment Score (ES)0.3205336
Normalized Enrichment Score (NES)1.6378598
Nominal p-value0.0056926
FDR q-value0.6614499
FWER p-Value0.922
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_TRANSCRIPTIONAL_REGULATION_BY_RUNX1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ccnd2Ccnd24031.1950.0126Yes
2H3c7H3c75871.0510.0305Yes
3H2bc8H2bc86361.0250.0532Yes
4H2bc6H2bc66521.0140.0770Yes
5H2ac10H2ac107240.9790.0977Yes
6H2ac6H2ac67260.9790.1211Yes
7H3c6H3c68620.9270.1380Yes
8Lmo2Lmo211650.8190.1456Yes
9H4c8H4c812580.7950.1610Yes
10H4c3H4c313040.7830.1780Yes
11H2ajH2aj13050.7820.1968Yes
12H2bc13H2bc1315820.7160.2030Yes
13H2ac7H2ac719930.6490.2022Yes
14H3c15H3c1519980.6470.2176Yes
15H3c11H3c1122750.6070.2211Yes
16CtskCtsk23770.5920.2313Yes
17H2bc15H2bc1524590.5820.2420Yes
18H2bc4H2bc425700.5700.2513Yes
19H4c4H4c428090.5400.2548Yes
20H3c4H3c431310.5050.2540Yes
21H4c14H4c1431930.4980.2636Yes
22H4c1H4c132550.4920.2729Yes
23H2bc3H2bc333300.4860.2816Yes
24H4c11H4c1134630.4750.2878Yes
25Ccnd3Ccnd335400.4670.2960Yes
26H4c9H4c937970.4440.2964Yes
27Smarcd3Smarcd338220.4420.3060Yes
28Cdk6Cdk638840.4380.3141Yes
29Phc3Phc339830.4310.3205Yes
30Lmo1Lmo144030.3980.3133No
31H3c8H3c845300.3890.3176No
32Psma5Psma555040.3260.2865No
33CtslCtsl55810.3210.2912No
34Psmd8Psmd857150.3140.2934No
35Esr1Esr162170.2860.2802No
36Foxp3Foxp363140.2800.2831No
37Cdk7Cdk769100.2490.2652No
38H2ac8H2ac871310.2380.2621No
39Smarcc1Smarcc172920.2310.2613No
40Ring1Ring176880.2130.2506No
41H4c6H4c678060.2080.2509No
42Psma7Psma779030.2030.2519No
43Rps27aRps27a79580.2010.2546No
44H2bc26H2bc2681060.1940.2533No
45Psmd14Psmd1481610.1920.2558No
46Kmt2aKmt2a82290.1900.2577No
47H2bc11H2bc1183740.1840.2563No
48ItchItch92710.1480.2240No
49Mnat1Mnat194990.1380.2182No
50Sin3bSin3b95690.1360.2187No
51Cbx6Cbx695800.1350.2215No
52H2ac19H2ac1996960.1300.2201No
53Psmc1Psmc197230.1290.2221No
54Pcgf5Pcgf599110.1220.2175No
55Kat2bKat2b102920.1070.2049No
56Psmd13Psmd13103780.1030.2040No
57UbbUbb104210.1020.2047No
58Gata3Gata3106710.0920.1970No
59Smarce1Smarce1107460.0890.1961No
60Prmt1Prmt1109360.0820.1905No
61Psmd2Psmd2109450.0810.1922No
62Cbx8Cbx8110420.0780.1902No
63Hdac1Hdac1110440.0780.1920No
64Psmc3Psmc3110850.0760.1923No
65Pbrm1Pbrm1111530.0740.1913No
66H3c2H3c2113490.0670.1851No
67Psma6Psma6114670.0630.1819No
68Pax5Pax5115200.0610.1813No
69Psmc5Psmc5116220.0570.1786No
70RybpRybp116590.0550.1785No
71PmlPml117540.0520.1760No
72Psmd6Psmd6119090.0470.1710No
73Psmb1Psmb1121720.0380.1614No
74Rnf2Rnf2121750.0380.1622No
75Cbx4Cbx4124730.0270.1510No
76Ptpn11Ptpn11126070.0230.1462No
77Psmd1Psmd1126480.0220.1452No
78Psmd7Psmd7127550.0180.1413No
79Psmc6Psmc6130260.0080.1307No
80Phc1Phc1131640.0030.1253No
81Ash2lAsh2l13336-0.0030.1185No
82Tal1Tal113461-0.0080.1137No
83Tcf12Tcf1213600-0.0130.1085No
84H4c12H4c1213836-0.0210.0996No
85Phc2Phc213840-0.0210.1000No
86Zfpm1Zfpm114096-0.0310.0905No
87Uba52rtUba52rt14172-0.0330.0883No
88H4c16H4c1614184-0.0340.0887No
89Psmd12Psmd1214576-0.0470.0741No
90Cbx2Cbx214629-0.0490.0732No
91Ep300Ep30014962-0.0620.0614No
92Psmc4Psmc415193-0.0700.0539No
93Ccnd1Ccnd115281-0.0730.0522No
94Smarcd2Smarcd215286-0.0730.0538No
95Uba52Uba5215308-0.0740.0547No
96Tcf3Tcf315360-0.0760.0545No
97Smarcb1Smarcb115500-0.0810.0509No
98Arid1aArid1a15784-0.0910.0417No
99Ldb1Ldb115805-0.0910.0431No
100Setd1bSetd1b15829-0.0920.0444No
101Psma3Psma316066-0.1020.0374No
102Csnk2a2Csnk2a216082-0.1020.0392No
103H2bc9H2bc916136-0.1040.0396No
104Psmb7Psmb716224-0.1070.0387No
105Adrm1Adrm116245-0.1080.0405No
106Psmb5Psmb516338-0.1110.0395No
107Psma4Psma416432-0.1150.0385No
108Psmd11Psmd1116444-0.1150.0408No
109H3f3bH3f3b16446-0.1150.0435No
110Psma2Psma216516-0.1180.0436No
111Psmd3Psmd316632-0.1220.0419No
112Gata2Gata216737-0.1260.0408No
113UbcUbc16741-0.1260.0437No
114Smarcc2Smarcc217494-0.1570.0174No
115Psma1Psma117651-0.1620.0150No
116Psmb3Psmb317663-0.1630.0185No
117Prmt6Prmt617695-0.1650.0212No
118Psmc2Psmc217846-0.1710.0193No
119Psmb4Psmb417870-0.1720.0225No
120Yap1Yap117872-0.1720.0266No
121H2axH2ax18012-0.1780.0253No
122Hipk2Hipk218368-0.1940.0158No
123Elf1Elf118659-0.2070.0091No
124CbfbCbfb18774-0.2120.0096No
125Yaf2Yaf218932-0.2180.0086No
126Elf2Elf219174-0.2290.0045No
127Sin3aSin3a19207-0.2310.0087No
128Bmi1Bmi119222-0.2310.0137No
129Psmb6Psmb619269-0.2330.0175No
130Rbbp5Rbbp519379-0.2380.0188No
131H2az2H2az219504-0.2440.0197No
132Setd1aSetd1a19691-0.2550.0184No
133Kmt2bKmt2b19864-0.2640.0178No
134H3f3aH3f3a19922-0.2670.0220No
135Csnk2a1Csnk2a120343-0.2890.0121No
136Auts2Auts220919-0.321-0.0032No
137Actl6aActl6a21153-0.336-0.0045No
138Psmb2Psmb221311-0.347-0.0024No
139Abl1Abl121574-0.366-0.0041No
140Csnk2bCsnk2b21623-0.3700.0028No
141Wdr5Wdr522206-0.415-0.0105No
142CcnhCcnh22260-0.419-0.0026No
143Scmh1Scmh122819-0.477-0.0135No
144Kmt2dKmt2d22926-0.490-0.0059No
145Smarcd1Smarcd123281-0.532-0.0073No
146H2bc21H2bc2123472-0.560-0.0015No
147Smarca4Smarca425102-2.7850.0002No
Table: GSEA details [plain text format]



Fig 2: REACTOME_TRANSCRIPTIONAL_REGULATION_BY_RUNX1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: REACTOME_TRANSCRIPTIONAL_REGULATION_BY_RUNX1: Random ES distribution   
Gene set null distribution of ES for REACTOME_TRANSCRIPTIONAL_REGULATION_BY_RUNX1