Details for gene set BIOCARTA_ATM_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	KO_vs_WTandHET.KO_vs_WTandHET.cls#WT_versus_KO
Phenotype	KO_vs_WTandHET.cls#WT_versus_KO
Upregulated in class	KO
GeneSet	BIOCARTA_ATM_PATHWAY
Enrichment Score (ES)	-0.34296796
Normalized Enrichment Score (NES)	-1.2134763
Nominal p-value	0.21206225
FDR q-value	0.61143637
FWER p-Value	0.944

Fig 1: Enrichment plot: BIOCARTA_ATM_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gadd45a	Gadd45a	914	0.971	0.1427	No
2	Jun	Jun	2502	0.522	0.1731	No
3	Abl1	Abl1	8455	0.109	-0.0584	No
4	Mdm2	Mdm2	8497	0.107	-0.0401	No
5	Mapk8	Mapk8	9423	0.072	-0.0658	No
6	Rad50	Rad50	11119	0.010	-0.1357	No
7	Nbn	Nbn	11849	-0.016	-0.1636	No
8	Chek2	Chek2	12207	-0.028	-0.1735	No
9	Nfkbia	Nfkbia	13066	-0.058	-0.1989	No
10	Rpa1	Rpa1	14023	-0.095	-0.2216	No
11	Nfkb1	Nfkb1	14105	-0.098	-0.2066	No
12	Rela	Rela	15079	-0.139	-0.2219	No
13	Mre11a	Mre11a	17135	-0.228	-0.2663	No
14	Trp53	Trp53	18947	-0.319	-0.2835	Yes
15	Cdkn1a	Cdkn1a	20276	-0.417	-0.2617	Yes
16	Brca1	Brca1	20642	-0.453	-0.1925	Yes
17	Chek1	Chek1	22334	-0.739	-0.1261	Yes
18	Rad51	Rad51	22908	-0.973	0.0314	Yes

Fig 2: BIOCARTA_ATM_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_ATM_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_ATM_PATHWAY