Details for gene set BIOCARTA_VIP_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	KO_vs_WTandHET.KO_vs_WTandHET.cls#WT_versus_KO
Phenotype	KO_vs_WTandHET.cls#WT_versus_KO
Upregulated in class	KO
GeneSet	BIOCARTA_VIP_PATHWAY
Enrichment Score (ES)	-0.49048588
Normalized Enrichment Score (NES)	-1.6531806
Nominal p-value	0.021912351
FDR q-value	0.40410876
FWER p-Value	0.414

Fig 1: Enrichment plot: BIOCARTA_VIP_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Vipr2	Vipr2	2053	0.602	-0.0212	No
2	Ppp3cb	Ppp3cb	2234	0.573	0.0337	No
3	Map3k1	Map3k1	3673	0.386	0.0149	No
4	Prkacb	Prkacb	5110	0.275	-0.0158	No
5	Plcg1	Plcg1	5128	0.274	0.0133	No
6	Ppp3ca	Ppp3ca	5298	0.262	0.0348	No
7	Vip	Vip	6983	0.174	-0.0175	No
8	Gnaq	Gnaq	7124	0.167	-0.0052	No
9	Calm3	Calm3	10304	0.039	-0.1355	No
10	Calm1	Calm1	10783	0.021	-0.1534	No
11	Nfatc1	Nfatc1	11526	-0.005	-0.1843	No
12	Chuk	Chuk	11940	-0.019	-0.1997	No
13	Nfkbia	Nfkbia	13066	-0.058	-0.2410	No
14	Nfatc2	Nfatc2	13663	-0.080	-0.2574	No
15	Nfkb1	Nfkb1	14105	-0.098	-0.2654	No
16	Prkar2b	Prkar2b	14277	-0.106	-0.2611	No
17	Rela	Rela	15079	-0.139	-0.2798	No
18	Ppp3cc	Ppp3cc	16263	-0.186	-0.3096	No
19	Prkar2a	Prkar2a	20537	-0.442	-0.4422	Yes
20	Prkar1a	Prkar1a	21616	-0.579	-0.4247	Yes
21	Prkar1b	Prkar1b	22681	-0.865	-0.3753	Yes
22	Egr2	Egr2	22915	-0.977	-0.2786	Yes
23	Myc	Myc	22951	-0.997	-0.1713	Yes
24	Egr3	Egr3	23510	-1.841	0.0059	Yes

Fig 2: BIOCARTA_VIP_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_VIP_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_VIP_PATHWAY