Datasetdata_collapsed_to_symbols.class.cls
#24hr_versus_0hr.class.cls
#24hr_versus_0hr_repos
Phenotypeclass.cls#24hr_versus_0hr_repos
Upregulated in class0hr
GeneSetKEGG_MISMATCH_REPAIR
Enrichment Score (ES)-0.60392255
Normalized Enrichment Score (NES)-1.3734666
Nominal p-value0.07797271
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: KEGG_MISMATCH_REPAIR   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MLH1MLH1
Entrez,  Source
mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)32081.505-0.1912No
2PMS2PMS2
Entrez,  Source
PMS2 postmeiotic segregation increased 2 (S. cerevisiae)41261.089-0.2282No
3SSBP1SSBP1
Entrez,  Source
single-stranded DNA binding protein 142681.047-0.2104No
4MLH3MLH3
Entrez,  Source
mutL homolog 3 (E. coli)59540.495-0.3187No
5POLD2POLD2
Entrez,  Source
polymerase (DNA directed), delta 2, regulatory subunit 50kDa62420.422-0.3282No
6RPA2RPA2
Entrez,  Source
replication protein A2, 32kDa71700.179-0.3903No
7MSH3MSH3
Entrez,  Source
mutS homolog 3 (E. coli)8318-0.126-0.4697No
8RPA4RPA4
Entrez,  Source
replication protein A4, 34kDa10180-0.816-0.5821Yes
9RFC3RFC3
Entrez,  Source
replication factor C (activator 1) 3, 38kDa10238-0.846-0.5636Yes
10POLD4POLD4
Entrez,  Source
polymerase (DNA-directed), delta 410606-1.021-0.5628Yes
11RFC1RFC1
Entrez,  Source
replication factor C (activator 1) 1, 145kDa10667-1.050-0.5390Yes
12RPA3RPA3
Entrez,  Source
replication protein A3, 14kDa11062-1.254-0.5339Yes
13POLD3POLD3
Entrez,  Source
polymerase (DNA-directed), delta 3, accessory subunit11658-1.610-0.5338Yes
14RFC2RFC2
Entrez,  Source
replication factor C (activator 1) 2, 40kDa11774-1.680-0.4972Yes
15RPA1RPA1
Entrez,  Source
replication protein A1, 70kDa12081-1.900-0.4685Yes
16EXO1EXO1
Entrez,  Source
exonuclease 112092-1.908-0.4182Yes
17RFC5RFC5
Entrez,  Source
replication factor C (activator 1) 5, 36.5kDa12486-2.247-0.3865Yes
18PCNAPCNA
Entrez,  Source
proliferating cell nuclear antigen12539-2.300-0.3287Yes
19RFC4RFC4
Entrez,  Source
replication factor C (activator 1) 4, 37kDa13033-2.836-0.2885Yes
20LIG1LIG1
Entrez,  Source
ligase I, DNA, ATP-dependent13041-2.851-0.2128Yes
21POLD1POLD1
Entrez,  Source
polymerase (DNA directed), delta 1, catalytic subunit 125kDa13326-3.223-0.1471Yes
22MSH6MSH6
Entrez,  Source
mutS homolog 6 (E. coli)13340-3.233-0.0616Yes
23MSH2MSH2
Entrez,  Source
mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)13647-3.7670.0170Yes
Table: GSEA details [plain text format]



Fig 2: KEGG_MISMATCH_REPAIR   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KEGG_MISMATCH_REPAIR: Random ES distribution   
Gene set null distribution of ES for KEGG_MISMATCH_REPAIR