Datasetdata_collapsed_to_symbols.class.cls
#24hr_versus_0hr.class.cls
#24hr_versus_0hr_repos
Phenotypeclass.cls#24hr_versus_0hr_repos
Upregulated in class0hr
GeneSetNABA_ECM_AFFILIATED
Enrichment Score (ES)-0.39182857
Normalized Enrichment Score (NES)-1.4075093
Nominal p-value0.0
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: NABA_ECM_AFFILIATED   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LGALS8LGALS8
Entrez,  Source
lectin, galactoside-binding, soluble, 8 (galectin 8)3873.7460.0028No
2ANXA7ANXA7
Entrez,  Source
annexin A77853.3190.0013No
3ANXA2ANXA2
Entrez,  Source
annexin A29083.1800.0187No
4PLXNA2PLXNA2
Entrez,  Source
plexin A214042.7220.0052No
5ANXA5ANXA5
Entrez,  Source
annexin A522892.043-0.0421No
6LGALS7LGALS7
Entrez,  Source
lectin, galactoside-binding, soluble, 7 (galectin 7)24921.916-0.0409No
7MUC2MUC2
Entrez,  Source
mucin 2, oligomeric mucus/gel-forming25861.857-0.0324No
8LMAN1LMAN1
Entrez,  Source
lectin, mannose-binding, 127621.756-0.0306No
9SEMA7ASEMA7A
Entrez,  Source
semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)33921.406-0.0646No
10ANXA3ANXA3
Entrez,  Source
annexin A335951.318-0.0684No
11MUC4MUC4
Entrez,  Source
mucin 4, cell surface associated43321.021-0.1134No
12LGALS4LGALS4
Entrez,  Source
lectin, galactoside-binding, soluble, 4 (galectin 4)44360.983-0.1128No
13CD209CD209
Entrez,  Source
CD209 molecule44800.969-0.1079No
14CLEC10ACLEC10A
Entrez,  Source
C-type lectin domain family 10, member A45590.936-0.1059No
15SEMA3CSEMA3C
Entrez,  Source
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C47240.874-0.1105No
16SFTPBSFTPB
Entrez,  Source
surfactant, pulmonary-associated protein B47560.863-0.1057No
17LGALS1LGALS1
Entrez,  Source
lectin, galactoside-binding, soluble, 1 (galectin 1)48180.840-0.1032No
18LGALS9LGALS9
Entrez,  Source
lectin, galactoside-binding, soluble, 9 (galectin 9)49080.817-0.1029No
19C1QTNF5C1QTNF5
Entrez,  Source
C1q and tumor necrosis factor related protein 549810.793-0.1016No
20LMAN1LLMAN1L
Entrez,  Source
lectin, mannose-binding, 1 like50550.769-0.1006No
21CLEC4MCLEC4M
Entrez,  Source
C-type lectin domain family 4, member M50800.760-0.0961No
22LGALS3LGALS3
Entrez,  Source
lectin, galactoside-binding, soluble, 3 (galectin 3)51510.738-0.0950No
23MUC7MUC7
Entrez,  Source
mucin 7, secreted52950.689-0.0997No
24MUC6MUC6
Entrez,  Source
mucin 6, oligomeric mucus/gel-forming54190.651-0.1033No
25SDC4SDC4
Entrez,  Source
syndecan 4 (amphiglycan, ryudocan)54360.646-0.0991No
26CLEC4ACLEC4A
Entrez,  Source
C-type lectin domain family 4, member A56260.591-0.1080No
27LGALS12LGALS12
Entrez,  Source
lectin, galactoside-binding, soluble, 12 (galectin 12)59300.501-0.1258No
28MUC8MUC8
Entrez,  Source
mucin 861220.453-0.1359No
29PLXDC1PLXDC1
Entrez,  Source
plexin domain containing 168190.278-0.1841No
30SEMA4GSEMA4G
Entrez,  Source
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G69180.250-0.1891No
31FCN1FCN1
Entrez,  Source
ficolin (collagen/fibrinogen domain containing) 172900.152-0.2148No
32SFTPA1SFTPA1
Entrez,  Source
surfactant, pulmonary-associated protein A173770.125-0.2200No
33MUC3AMUC3A
Entrez,  Source
mucin 3A, cell surface associated74190.117-0.2220No
34SEMA4ASEMA4A
Entrez,  Source
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A77070.038-0.2425No
35ITLN2ITLN2
Entrez,  Source
intelectin 278360.003-0.2517No
36SDC3SDC3
Entrez,  Source
syndecan 3 (N-syndecan)8038-0.054-0.2659No
37SEMA6ASEMA6A
Entrez,  Source
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A8053-0.057-0.2664No
38SFTPCSFTPC
Entrez,  Source
surfactant, pulmonary-associated protein C8071-0.062-0.2671No
39HPXHPX
Entrez,  Source
hemopexin8203-0.098-0.2758No
40SEMA4FSEMA4F
Entrez,  Source
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F8214-0.101-0.2757No
41MUC5BMUC5B
Entrez,  Source
mucin 5B, oligomeric mucus/gel-forming8324-0.128-0.2826No
42FCN3FCN3
Entrez,  Source
ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)8419-0.158-0.2881No
43C1QTNF7C1QTNF7
Entrez,  Source
C1q and tumor necrosis factor related protein 78578-0.207-0.2978No
44C1QL1C1QL1
Entrez,  Source
complement component 1, q subcomponent-like 18780-0.273-0.3101No
45SEMA3BSEMA3B
Entrez,  Source
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B8834-0.290-0.3116No
46MUC5ACMUC5AC
Entrez,  Source
mucin 5AC, oligomeric mucus/gel-forming8892-0.312-0.3132No
47C1QTNF2C1QTNF2
Entrez,  Source
C1q and tumor necrosis factor related protein 28965-0.338-0.3156No
48ANXA1ANXA1
Entrez,  Source
annexin A19092-0.378-0.3216No
49SEMA4DSEMA4D
Entrez,  Source
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D9098-0.380-0.3189No
50SEMA5ASEMA5A
Entrez,  Source
sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A9217-0.416-0.3240No
51SEMA6BSEMA6B
Entrez,  Source
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B9231-0.422-0.3214No
52OVGP1OVGP1
Entrez,  Source
oviductal glycoprotein 1, 120kDa (mucin 9, oviductin)9820-0.648-0.3587No
53REG1AREG1A
Entrez,  Source
regenerating islet-derived 1 alpha (pancreatic stone protein, pancreatic thread protein)9901-0.679-0.3589No
54ANXA11ANXA11
Entrez,  Source
annexin A119952-0.700-0.3568No
55SDC1SDC1
Entrez,  Source
syndecan 110216-0.835-0.3690No
56C1QTNF4C1QTNF4
Entrez,  Source
C1q and tumor necrosis factor related protein 410294-0.872-0.3674No
57COLEC11COLEC11
Entrez,  Source
collectin sub-family member 1110475-0.958-0.3725No
58GPC4GPC4
Entrez,  Source
glypican 410742-1.093-0.3828Yes
59PLXND1PLXND1
Entrez,  Source
plexin D110830-1.138-0.3798Yes
60GPC1GPC1
Entrez,  Source
glypican 110845-1.149-0.3713Yes
61PLXNA3PLXNA3
Entrez,  Source
plexin A310846-1.150-0.3619Yes
62ANXA4ANXA4
Entrez,  Source
annexin A411011-1.229-0.3636Yes
63ANXA6ANXA6
Entrez,  Source
annexin A611239-1.346-0.3690Yes
64CLEC3BCLEC3B
Entrez,  Source
C-type lectin domain family 3, member B11296-1.381-0.3617Yes
65SDC2SDC2
Entrez,  Source
syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan)11405-1.446-0.3576Yes
66GPC3GPC3
Entrez,  Source
glypican 311524-1.522-0.3537Yes
67CSPG5CSPG5
Entrez,  Source
chondroitin sulfate proteoglycan 5 (neuroglycan C)11790-1.692-0.3589Yes
68PLXNA1PLXNA1
Entrez,  Source
plexin A112030-1.861-0.3609Yes
69SEMA4CSEMA4C
Entrez,  Source
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C12033-1.865-0.3457Yes
70PLXNB1PLXNB1
Entrez,  Source
plexin B112041-1.871-0.3308Yes
71CLEC11ACLEC11A
Entrez,  Source
C-type lectin domain family 11, member A12112-1.930-0.3200Yes
72C1QTNF3C1QTNF3
Entrez,  Source
C1q and tumor necrosis factor related protein 312218-2.009-0.3111Yes
73CSPG4CSPG4
Entrez,  Source
chondroitin sulfate proteoglycan 4 (melanoma-associated)12340-2.111-0.3025Yes
74ANXA8ANXA8
Entrez,  Source
annexin A812607-2.358-0.3024Yes
75SFTPA2SFTPA2
Entrez,  Source
surfactant, pulmonary-associated protein A212782-2.547-0.2940Yes
76PLXNB2PLXNB2
Entrez,  Source
plexin B212845-2.623-0.2769Yes
77MUC20MUC20
Entrez,  Source
mucin 20, cell surface associated12965-2.758-0.2628Yes
78SEMA3DSEMA3D
Entrez,  Source
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D13105-2.937-0.2487Yes
79C1QTNF6C1QTNF6
Entrez,  Source
C1q and tumor necrosis factor related protein 613125-2.967-0.2257Yes
80SEMA5BSEMA5B
Entrez,  Source
sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B13145-2.994-0.2024Yes
81SEMA3FSEMA3F
Entrez,  Source
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F13241-3.090-0.1839Yes
82SEMA6CSEMA6C
Entrez,  Source
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C13342-3.235-0.1645Yes
83ANXA9ANXA9
Entrez,  Source
annexin A913449-3.382-0.1443Yes
84CLEC2DCLEC2D
Entrez,  Source
C-type lectin domain family 2, member D13641-3.749-0.1273Yes
85MUC1MUC1
Entrez,  Source
mucin 1, cell surface associated13701-3.898-0.0995Yes
86PLXDC2PLXDC2
Entrez,  Source
plexin domain containing 213729-3.982-0.0687Yes
87GPC6GPC6
Entrez,  Source
glypican 613875-4.709-0.0405Yes
88PLXNA413879-4.9760.0003Yes
Table: GSEA details [plain text format]



Fig 2: NABA_ECM_AFFILIATED   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NABA_ECM_AFFILIATED: Random ES distribution   
Gene set null distribution of ES for NABA_ECM_AFFILIATED