Datasetdata_collapsed_to_symbols.class.cls
#24hr_versus_0hr.class.cls
#24hr_versus_0hr_repos
Phenotypeclass.cls#24hr_versus_0hr_repos
Upregulated in class24hr
GeneSetPID_P38_MKK3_6PATHWAY
Enrichment Score (ES)0.3935281
Normalized Enrichment Score (NES)1.606313
Nominal p-value0.0
FDR q-value0.64154583
FWER p-Value0.842
Table: GSEA Results Summary



Fig 1: Enrichment plot: PID_P38_MKK3_6PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MAP2K3MAP2K3
Entrez,  Source
mitogen-activated protein kinase kinase 37683.3350.0349Yes
2TRAF6TRAF6
Entrez,  Source
TNF receptor-associated factor 613382.7710.0690Yes
3GADD45AGADD45A
Entrez,  Source
growth arrest and DNA-damage-inducible, alpha15812.5680.1211Yes
4GADD45GGADD45G
Entrez,  Source
growth arrest and DNA-damage-inducible, gamma16242.5370.1867Yes
5TXNTXN
Entrez,  Source
thioredoxin17672.4210.2421Yes
6MAP3K10MAP3K10
Entrez,  Source
mitogen-activated protein kinase kinase kinase 1018332.3770.3018Yes
7MAP3K7MAP3K7
Entrez,  Source
mitogen-activated protein kinase kinase kinase 724441.9500.3106Yes
8MAPK14MAPK14
Entrez,  Source
mitogen-activated protein kinase 1426561.8100.3445Yes
9MAP3K4MAP3K4
Entrez,  Source
mitogen-activated protein kinase kinase kinase 431161.5500.3533Yes
10TAOK2TAOK2
Entrez,  Source
TAO kinase 231391.5420.3935Yes
11RAC1RAC1
Entrez,  Source
ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)50830.7600.2739No
12GADD45BGADD45B
Entrez,  Source
growth arrest and DNA-damage-inducible, beta63220.3980.1954No
13MAPK11MAPK11
Entrez,  Source
mitogen-activated protein kinase 1163720.3870.2024No
14TAOK1TAOK1
Entrez,  Source
TAO kinase 177130.0370.1067No
15MAP3K6MAP3K6
Entrez,  Source
mitogen-activated protein kinase kinase kinase 69787-0.637-0.0256No
16ATMATM
Entrez,  Source
ataxia telangiectasia mutated (includes complementation groups A, C and D)9880-0.670-0.0141No
17CCM2CCM2
Entrez,  Source
cerebral cavernous malformation 29971-0.709-0.0014No
18MAP3K5MAP3K5
Entrez,  Source
mitogen-activated protein kinase kinase kinase 510586-1.013-0.0182No
19MAP3K3MAP3K3
Entrez,  Source
mitogen-activated protein kinase kinase kinase 311410-1.448-0.0384No
20MAP2K6MAP2K6
Entrez,  Source
mitogen-activated protein kinase kinase 611959-1.813-0.0288No
21MAP3K1MAP3K1
Entrez,  Source
mitogen-activated protein kinase kinase kinase 112981-2.769-0.0275No
22CAMK2BCAMK2B
Entrez,  Source
calcium/calmodulin-dependent protein kinase (CaM kinase) II beta13464-3.4130.0302No
Table: GSEA details [plain text format]



Fig 2: PID_P38_MKK3_6PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: PID_P38_MKK3_6PATHWAY: Random ES distribution   
Gene set null distribution of ES for PID_P38_MKK3_6PATHWAY