Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | data_collapsed_to_symbols.class.cls #24hr_versus_0hr.class.cls #24hr_versus_0hr_repos |
| Phenotype | class.cls#24hr_versus_0hr_repos |
| Upregulated in class | 0hr |
| GeneSet | REACTOME_HS_GAG_BIOSYNTHESIS |
| Enrichment Score (ES) | -0.48832574 |
| Normalized Enrichment Score (NES) | -1.4118706 |
| Nominal p-value | 0.10119048 |
| FDR q-value | 1.0 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | NDST2 | NDST2 Entrez, Source | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 | 1169 | 2.918 | 0.0105 | No |
| 2 | HS6ST2 | HS6ST2 Entrez, Source | heparan sulfate 6-O-sulfotransferase 2 | 3790 | 1.233 | -0.1385 | No |
| 3 | EXT2 | EXT2 Entrez, Source | exostoses (multiple) 2 | 4137 | 1.084 | -0.1282 | No |
| 4 | SDC4 | SDC4 Entrez, Source | syndecan 4 (amphiglycan, ryudocan) | 5436 | 0.646 | -0.2008 | No |
| 5 | HS6ST1 | HS6ST1 Entrez, Source | heparan sulfate 6-O-sulfotransferase 1 | 6604 | 0.330 | -0.2743 | No |
| 6 | HS3ST3B1 | HS3ST3B1 Entrez, Source | heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 | 6674 | 0.313 | -0.2691 | No |
| 7 | NDST4 | NDST4 Entrez, Source | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 | 6832 | 0.275 | -0.2715 | No |
| 8 | NDST1 | NDST1 Entrez, Source | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 | 7605 | 0.067 | -0.3250 | No |
| 9 | SDC3 | SDC3 Entrez, Source | syndecan 3 (N-syndecan) | 8038 | -0.054 | -0.3544 | No |
| 10 | HS2ST1 | HS2ST1 Entrez, Source | heparan sulfate 2-O-sulfotransferase 1 | 8911 | -0.317 | -0.4070 | No |
| 11 | HSPG2 | HSPG2 Entrez, Source | heparan sulfate proteoglycan 2 (perlecan) | 9127 | -0.390 | -0.4098 | No |
| 12 | SDC1 | SDC1 Entrez, Source | syndecan 1 | 10216 | -0.835 | -0.4612 | Yes |
| 13 | HS3ST3A1 | HS3ST3A1 Entrez, Source | heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 | 10439 | -0.940 | -0.4466 | Yes |
| 14 | GPC4 | GPC4 Entrez, Source | glypican 4 | 10742 | -1.093 | -0.4329 | Yes |
| 15 | GPC1 | GPC1 Entrez, Source | glypican 1 | 10845 | -1.149 | -0.4029 | Yes |
| 16 | SDC2 | SDC2 Entrez, Source | syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan) | 11405 | -1.446 | -0.3963 | Yes |
| 17 | GPC3 | GPC3 Entrez, Source | glypican 3 | 11524 | -1.522 | -0.3553 | Yes |
| 18 | EXT1 | EXT1 Entrez, Source | exostoses (multiple) 1 | 11856 | -1.744 | -0.3225 | Yes |
| 19 | AGRN | 12923 | -2.708 | -0.3114 | Yes | ||
| 20 | GLCE | GLCE Entrez, Source | UDP-glucuronic acid epimerase | 13481 | -3.445 | -0.2396 | Yes |
| 21 | HS3ST1 | HS3ST1 Entrez, Source | heparan sulfate (glucosamine) 3-O-sulfotransferase 1 | 13542 | -3.551 | -0.1285 | Yes |
| 22 | GPC6 | GPC6 Entrez, Source | glypican 6 | 13875 | -4.709 | 0.0006 | Yes |
