Datasetdata_collapsed_to_symbols.class.cls
#4hr_versus_0hr.class.cls
#4hr_versus_0hr_repos
Phenotypeclass.cls#4hr_versus_0hr_repos
Upregulated in class4hr
GeneSetKEGG_MTOR_SIGNALING_PATHWAY
Enrichment Score (ES)0.45029625
Normalized Enrichment Score (NES)1.7349988
Nominal p-value0.0
FDR q-value0.20992547
FWER p-Value0.445
Table: GSEA Results Summary



Fig 1: Enrichment plot: KEGG_MTOR_SIGNALING_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RPS6KA3RPS6KA3
Entrez,  Source
ribosomal protein S6 kinase, 90kDa, polypeptide 31083.6220.0628Yes
2RHEBRHEB
Entrez,  Source
Ras homolog enriched in brain2443.1300.1140Yes
3BRAFBRAF
Entrez,  Source
v-raf murine sarcoma viral oncogene homolog B12813.0370.1705Yes
4FIGFFIGF
Entrez,  Source
c-fos induced growth factor (vascular endothelial growth factor D)4572.6700.2099Yes
5HIF1AHIF1A
Entrez,  Source
hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)6982.3020.2374Yes
6RPS6KA1RPS6KA1
Entrez,  Source
ribosomal protein S6 kinase, 90kDa, polypeptide 17112.2770.2809Yes
7PIK3CDPIK3CD
Entrez,  Source
phosphoinositide-3-kinase, catalytic, delta polypeptide7952.1810.3174Yes
8PRKAA1PRKAA1
Entrez,  Source
protein kinase, AMP-activated, alpha 1 catalytic subunit8542.1160.3544Yes
9ULK1ULK1
Entrez,  Source
unc-51-like kinase 1 (C. elegans)10121.9610.3813Yes
10DDIT4DDIT4
Entrez,  Source
DNA-damage-inducible transcript 410951.8840.4121Yes
11RPS6KB1RPS6KB1
Entrez,  Source
ribosomal protein S6 kinase, 70kDa, polypeptide 114091.6050.4207Yes
12PGFPGF
Entrez,  Source
placental growth factor, vascular endothelial growth factor-related protein14281.5850.4503Yes
13TSC1TSC1
Entrez,  Source
tuberous sclerosis 119331.2550.4383No
14EIF4EBP1EIF4EBP1
Entrez,  Source
eukaryotic translation initiation factor 4E binding protein 124151.0240.4235No
15PDPK1PDPK1
Entrez,  Source
3-phosphoinositide dependent protein kinase-124641.0000.4396No
16PIK3R5PIK3R5
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 5, p10125740.9540.4503No
17RPS6KA6RPS6KA6
Entrez,  Source
ribosomal protein S6 kinase, 90kDa, polypeptide 636320.6590.3868No
18AKT2AKT2
Entrez,  Source
v-akt murine thymoma viral oncogene homolog 250090.3640.2945No
19PRKAA2PRKAA2
Entrez,  Source
protein kinase, AMP-activated, alpha 2 catalytic subunit50820.3510.2961No
20PIK3R3PIK3R3
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 3 (p55, gamma)52470.3200.2905No
21RPS6KA2RPS6KA2
Entrez,  Source
ribosomal protein S6 kinase, 90kDa, polypeptide 256380.2530.2672No
22EIF4BEIF4B
Entrez,  Source
eukaryotic translation initiation factor 4B61750.1680.2318No
23RPS6RPS6
Entrez,  Source
ribosomal protein S662450.1590.2299No
24EIF4EEIF4E
Entrez,  Source
eukaryotic translation initiation factor 4E71620.0150.1640No
25INSINS
Entrez,  Source
insulin72430.0040.1583No
26MAPK1MAPK1
Entrez,  Source
mitogen-activated protein kinase 17460-0.0290.1433No
27TSC2TSC2
Entrez,  Source
tuberous sclerosis 27488-0.0330.1420No
28RPS6KB2RPS6KB2
Entrez,  Source
ribosomal protein S6 kinase, 70kDa, polypeptide 28403-0.1820.0795No
29PIK3CAPIK3CA
Entrez,  Source
phosphoinositide-3-kinase, catalytic, alpha polypeptide8916-0.2660.0477No
30CAB39CAB39
Entrez,  Source
calcium binding protein 399768-0.406-0.0059No
31ULK2ULK2
Entrez,  Source
unc-51-like kinase 2 (C. elegans)10675-0.569-0.0603No
32PIK3CBPIK3CB
Entrez,  Source
phosphoinositide-3-kinase, catalytic, beta polypeptide10970-0.637-0.0691No
33STK11STK11
Entrez,  Source
serine/threonine kinase 1112314-1.056-0.1455No
34PIK3R1PIK3R1
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 1 (p85 alpha)12494-1.132-0.1364No
35VEGFCVEGFC
Entrez,  Source
vascular endothelial growth factor C12836-1.307-0.1356No
36MAPK3MAPK3
Entrez,  Source
mitogen-activated protein kinase 312941-1.374-0.1163No
37AKT1AKT1
Entrez,  Source
v-akt murine thymoma viral oncogene homolog 112950-1.382-0.0900No
38ULK3ULK3
Entrez,  Source
unc-51-like kinase 3 (C. elegans)13071-1.487-0.0697No
39CAB39LCAB39L
Entrez,  Source
calcium binding protein 39-like13093-1.504-0.0419No
40EIF4E2EIF4E2
Entrez,  Source
eukaryotic translation initiation factor 4E member 213345-1.786-0.0252No
41VEGFBVEGFB
Entrez,  Source
vascular endothelial growth factor B13837-3.2870.0033No
Table: GSEA details [plain text format]



Fig 2: KEGG_MTOR_SIGNALING_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KEGG_MTOR_SIGNALING_PATHWAY: Random ES distribution   
Gene set null distribution of ES for KEGG_MTOR_SIGNALING_PATHWAY